RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 EIF4E2O60573 245 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 CRLF1O75462 422 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 NUDT14O95848 222 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 OPN1LWP04000 364 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 HMGN2P05204 90 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 BCKDHAP12694 445 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 ATP12AP54707 1039 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 CLEC12BQ2HXU8 276 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 KANK2Q63ZY3 851 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 TFAP2EQ6VUC0 442 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 FCRLAQ7L513 359 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 P2RY8Q86VZ1 359 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 TOR1AIP2Q8NFQ8 470 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 ROBO4Q8WZ75 1007 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 KISS1RQ969F8 398 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 RADILQ96JH8 1075 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 C12orf49Q9H741 205 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 TNFRSF12AQ9NP84 129 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 FAIMQ9NVQ4 179 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 BAIAP2L1Q9UHR4 511 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 ICAM5Q9UMF0 924 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 DNAJC15Q9Y5T4 150 aa15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 RAI1Q7Z5J4 1906 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-227ENST00000602011 DUXAA6NLW8 204 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 PLAUP00749 431 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 FAM153BP0C7A2 387 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 LINC00032P0C843 101 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 KRT4P19013 534 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 SFTPDP35247 375 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 CCT3P49368 545 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 RPL38P63173 70 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TNK1Q13470 666 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TP53BP2Q13625 1128 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 LASP1Q14847 261 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TMEM176BQ3YBM2 270 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 FAM153CQ494X1 144 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 SLC25A53Q5H9E4 307 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 ZAR1Q86SH2 424 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TUSC5Q8IXB3 177 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 OR2T11Q8NH01 316 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 FBXO27Q8NI29 283 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 PIWIL2Q8TC59 973 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 SMAP2Q8WU79 429 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 CHMP6Q96FZ7 201 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 GATA5Q9BWX5 397 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 POTEKPQ9BYX7 375 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TMEM185BQ9H7F4 350 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 BCO1Q9HAY6 547 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 BARX1Q9HBU1 254 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 DTNAQ9Y4J8 743 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 TRAF6Q9Y4K3 522 aa15.85■□□□□ 0.13
SHKBP1-227ENST00000602011 ETV2O00321 342 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SCAMP2O15127 329 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 TLX2O43763 284 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 NPHS1O60500 1241 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 TP53P04637 393 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 DANCRP0C864 163 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 FKBP2P26885 142 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SLC7A1P30825 629 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SERPINB5P36952 375 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 ZNF117Q03924 483 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 FOXF1Q12946 379 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SELENBP1Q13228 472 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 CAPRIN1Q14444 709 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 CD226Q15762 336 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 Q6ZT83 130 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 C10orf107Q8IVU9 208 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 MAPK1IP1LQ8NDC0 245 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 OR5W2Q8NH69 310 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SFXN5Q8TD22 340 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 GPR119Q8TDV5 335 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 ZFP90Q8TF47 636 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 OIT3Q8WWZ8 545 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 MUCL1Q96DR8 90 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 NPAS1Q99742 590 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 TUBB1Q9H4B7 451 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SERINC1Q9NRX5 453 aa15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 SIRT3Q9NTG7 399 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-227ENST00000602011 NTN1O95631 604 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 AK1P00568 194 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 ADAP00813 363 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 PRKCAP17252 672 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 PRPS1L1P21108 318 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 CBFBQ13951 182 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 TAB1Q15750 504 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 ZNF672Q499Z4 452 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 GALNTL6Q49A17 601 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 DCST2Q5T1A1 773 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 CCNJQ5T5M9 372 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 NUFIP2Q7Z417 695 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 DDIASQ8IXT1 998 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 BANPQ8N9N5 519 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 FBXO30Q8TB52 745 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 CDS1Q92903 461 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 COQ8BQ96D53 544 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 REG4Q9BYZ8 158 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 MKS1Q9NXB0 559 aa15.83■□□□□ 0.12
SHKBP1-227ENST00000602011 CARD8Q9Y2G2 431 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms