RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ESPL1Q14674 2120 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 POU6F1Q14863 301 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TPSAB1Q15661 275 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TAF1BQ53T94 588 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZRANB3Q5FWF4 1079 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 DCAF10Q5QP82 559 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 IRGCQ6NXR0 463 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LRRC8BQ6P9F7 803 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 AFTPHQ6ULP2 937 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 DET1Q7L5Y6 550 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ISCA2Q86U28 154 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 VASH2Q86V25 355 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LRRC6Q86X45 466 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 COMMD2Q86X83 199 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 PIANPQ8IYJ0 282 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 CFAP206Q8IYR0 622 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TBC1D21Q8IYX1 336 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC22A15Q8IZD6 547 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 CLDN19Q8N6F1 224 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRELID2Q8N945 189 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC89Q8N998 374 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 WDSUB1Q8N9V3 476 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 DNAAF3Q8N9W5 541 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZBTB8BQ8NAP8 495 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SIDT2Q8NBJ9 832 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR1J1Q8NGS3 322 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR4L1Q8NH43 312 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR5K2Q8NHB8 316 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 C1orf54Q8WWF1 131 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ASZ1Q8WWH4 475 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TFGQ92734 400 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 KIAA1143Q96AT1 154 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 RMDN2Q96LZ7 410 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 C12orf66Q96MD2 445 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TGM7Q96PF1 710 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAP3K3Q99759 626 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OLFM1Q99784 485 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LMF2Q9BU23 707 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TUBB2BQ9BVA1 445 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 KIFC1Q9BW19 673 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 AP1M1Q9BXS5 423 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 MRPL1Q9BYD6 325 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 BARHL1Q9BZE3 327 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ULBP3Q9BZM4 244 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 IL22Q9GZX6 179 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 WWP1Q9H0M0 922 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 GPN2Q9H9Y4 310 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LZTFL1Q9NQ48 299 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC35C2Q9NQQ7 365 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 FGF21Q9NSA1 209 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 TREX1Q9NSU2 369 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 STARD5Q9NSY2 213 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 IMP3Q9NV31 184 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 HRASLS2Q9NWW9 162 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 BFARQ9NZS9 450 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 OSGIN1Q9UJX0 560 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 RARRES3Q9UL19 164 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 PSMD13Q9UNM6 376 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 PPP2R2CQ9Y2T4 447 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRIP1Q9Y3R0 1128 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 RPS6KL1Q9Y6S9 549 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 HIVEP3Q5T1R4 2406 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 LRRK2Q5S007 2527 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ASH1LQ9NR48 2969 aaKnown RBP3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 DOPEY2Q9Y3R5 2298 aa3.21□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZGRF1Q86YA3 2104 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CPAMD8Q8IZJ3 1885 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR6C74A6NCV1 312 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 C2orf74A8MZ97 194 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 H3BMH7 237 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 BTN3A3O00478 584 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCL22O00626 93 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRMT5O14744 637 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR10H2O60403 315 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ERAL1O75616 437 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 KIAA0754O94854 1291 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 GOT2P00505 430 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 NGFP01138 241 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 IFNB1P01574 187 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRB1P04280 392 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 RPN2P04844 631 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 HBQ1P09105 142 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAB40ALP0C0E4 278 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZSCAN5DPP0CG00 497 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TPBGLP0DKB5 382 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 MLNP12872 115 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ETS1P14921 441 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FOLR1P15328 257 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TCN2P20062 427 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OGNP20774 298 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CDH3P22223 829 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 F8A1P23610 371 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PDHA2P29803 388 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PBLDP30039 288 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRDX3P30048 256 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ATP5DP30049 168 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC6A6P31641 620 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCR7P32248 378 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SHMT2P34897 504 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms