RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TSSK3Q96PN8 268 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 NPAS1Q99742 590 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 HDHD5Q9BXW7 423 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 PARD6BQ9BYG5 372 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 ALG2Q9H553 416 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 NGBQ9NPG2 151 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 PAQR5Q9NXK6 330 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-210ENST00000590541 SH3BP4Q9P0V3 963 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 LPAR3Q9UBY5 353 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 PTGDR2Q9Y5Y4 395 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 YLPM1P49750 1951 aaKnown RBP15.4■□□□□ 0.06
RETREG3-210ENST00000590541 PIP5K1BO14986 540 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 RGS16O15492 202 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 RAMP1O60894 148 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 LYPLA1O75608 230 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 KCNH1O95259 989 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 OPN1LWP04000 364 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 BCKDHAP12694 445 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ETV4P43268 484 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 MLC1Q15049 377 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 NRF1Q16656 503 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 KRT71Q3SY84 523 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ATP6AP1LQ52LC2 224 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 XKR7Q5GH72 579 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 SFRP5Q5T4F7 317 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ZCCHC12Q6PEW1 402 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ZNF551Q7Z340 670 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 KIRREL3Q8IZU9 778 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ARIH2OSQ8N7S6 290 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 CDRT4Q8N9R6 151 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 OR6Y1Q8NGX8 325 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 PIWIL2Q8TC59 973 aaKnown RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 HSD17B8Q92506 261 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 HOXB13Q92826 284 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ZIM3Q96PE6 472 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 SHARPINQ9H0F6 387 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 CISD1Q9NZ45 108 aaKnown RBP15.39■□□□□ 0.05
RETREG3-210ENST00000590541 VDAC3Q9Y277 283 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 SNX8Q9Y5X2 465 aa15.39■□□□□ 0.05
RETREG3-210ENST00000590541 ELOA3DA6NLF2 546 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-210ENST00000590541 TNFSF11O14788 317 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ADAMDEC1O15204 470 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 SYNGR4O95473 234 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ZNF17P17021 662 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 PTNP21246 168 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 LCN1P31025 176 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 HPCAL1P37235 193 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 NUDT6P53370 316 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 HSPB3Q12988 150 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 MAD2L1Q13257 205 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ELOA3BQ3SY89 546 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 APOOLQ6UXV4 268 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 TFAP2EQ6VUC0 442 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 EXOC3L1Q86VI1 746 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 WDR75Q8IWA0 830 aaKnown RBP15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ELOA3Q8NG57 546 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 PRPF18Q99633 342 aaKnown RBP15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ATAD3AQ9NVI7 634 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 STOML1Q9UBI4 398 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 BAIAP2L1Q9UHR4 511 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 ATP6V1HQ9UI12 483 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
RETREG3-210ENST00000590541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.38■□□□□ 0.051e-38■■■■□ 20.7
RETREG3-210ENST00000590541 A0A0J9YW62 118 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 TMEM233B4DJY2 109 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 SHISA9B4DS77 424 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 TM9SF1O15321 606 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 BIRC5O15392 142 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 AKAP10O43572 662 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 NKX2-2O95096 273 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 HSPA4LO95757 839 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 ANGPTL1O95841 491 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 FESP07332 822 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 ZNF16P17020 682 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 IL32P24001 234 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 PSMA4P25789 261 aaKnown RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 GABRA3P34903 492 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 MAP3K8P41279 467 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 C21orf58P58505 322 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 IRX1P78414 480 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 PRR5P85299 388 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 C17orf67Q0P5P2 114 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 SMU1Q2TAY7 513 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 ZCCHC23Q6ZST2 131 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 NUFIP2Q7Z417 695 aaKnown RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 NUP43Q8NFH3 380 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 OR2V1Q8NHB1 315 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 ROBO4Q8WZ75 1007 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 CIDECQ96AQ7 238 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 MS4A4EQ96PG1 132 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 ACTL7BQ9Y614 415 aa15.37■□□□□ 0.05
RETREG3-210ENST00000590541 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-210ENST00000590541 SCAMP2O15127 329 aaKnown RBP15.36■□□□□ 0.05
RETREG3-210ENST00000590541 PEX11AO75192 247 aa15.36■□□□□ 0.05
RETREG3-210ENST00000590541 NGFRP08138 427 aa15.36■□□□□ 0.05
RETREG3-210ENST00000590541 IGHV4-31P0DP07 118 aa15.36■□□□□ 0.05
RETREG3-210ENST00000590541 PRPS1L1P21108 318 aa15.36■□□□□ 0.05
RETREG3-210ENST00000590541 RAC1P63000 192 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms