RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SSX8Q7RTT4 187 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 ARRDC2Q8TBH0 407 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 NEIL2Q969S2 332 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 OR6C1Q96RD1 312 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 CMSS1Q9BQ75 279 aaKnown RBP11.21□□□□□ -0.61
NEK9-210ENST00000557026 PLEKHM1Q9Y4G2 1056 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 A6NL46 340 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 H0YIG0 161 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 SERPINA5P05154 406 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ECI1P42126 302 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ZNF628Q5EBL2 1059 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 C1orf53Q5VUE5 145 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 LRRC56Q8IYG6 542 aaPredicted RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 RDH10Q8IZV5 341 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 MORN4Q8NDC4 146 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 OR9I1Q8NGQ6 314 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ARRDC3Q96B67 414 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 SLC41A2Q96JW4 573 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ZNF300Q96RE9 604 aaPredicted RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 CD93Q9NPY3 652 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 TMEM100Q9NV29 134 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 FARSAQ9Y285 508 aaKnown RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 B3GNT3Q9Y2A9 372 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 CHD4Q14839 1912 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 SMAD6O43541 496 aaKnown RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 UBBP0CG47 229 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 CREB1P16220 341 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 PRSS3P35030 304 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 BMXP51813 675 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 STK11Q15831 433 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 NNATQ16517 81 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ZNF551Q7Z340 670 aaPredicted RBP11.21□□□□□ -0.62
NEK9-210ENST00000557026 CLIP4Q8N3C7 705 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 SGCZQ96LD1 299 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 MGLLQ99685 303 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 PKP2Q99959 881 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 METTL9Q9H1A3 318 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 APMAPQ9HDC9 416 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 TM7SF3Q9NS93 570 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 ARMC1Q9NVT9 282 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 REV1Q9UBZ9 1251 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 RNF24Q9Y225 148 aa11.21□□□□□ -0.62
NEK9-210ENST00000557026 HIDE1A8MVS5 230 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 CBLP22681 906 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 KCNJ10P78508 379 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 GRB7Q14451 532 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 SFT2D3Q587I9 215 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 AMIGO3Q86WK7 504 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 PRRT1Q99946 306 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 GORASP2Q9H8Y8 452 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 ZNF443Q9Y2A4 671 aaPredicted RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 ANKRD34BA5PLL1 514 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 OR52A4PA6NMU1 304 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 SNNO75324 88 aaPredicted RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 IFNA10P01566 189 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 S100A2P29034 98 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 HLCSP50747 726 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 TAS2R20P59543 309 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 ENDOVQ8N8Q3 282 aaKnown RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 L3MBTL4Q8NA19 623 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 ZNF350Q9GZX5 532 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 AMBNQ9NP70 447 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 NME7Q9Y5B8 376 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 C5P01031 1676 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 INMT-MINDY4F8WBC2 141 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 HCRTR1O43613 425 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 HMGN2P05204 90 aaKnown RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 DPP4P27487 766 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 MAGEA12P43365 314 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 FXYD6P3P58550 94 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 CCNJQ5T5M9 372 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 OR2A2Q6IF42 318 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 UTS2BQ765I0 119 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 WDR53Q7Z5U6 358 aaPredicted RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 ELMOD2Q8IZ81 293 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 PHTF2Q8N3S3 785 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 Q8N402 240 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 BOCQ9BWV1 1114 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 OBP2BQ9NPH6 170 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 PCDHGA8Q9Y5G5 932 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 CREBL2O60519 120 aaPredicted RBP11.2□□□□□ -0.62
NEK9-210ENST00000557026 DPM1O60762 260 aa11.2□□□□□ -0.62
NEK9-210ENST00000557026 RP2O75695 350 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms