RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MCTS1Q9ULC4 181 aaKnown RBP14.52□□□□□ -0.09
DDX55-212ENST00000544738 PROCRQ9UNN8 238 aa14.52□□□□□ -0.09
DDX55-212ENST00000544738 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.52□□□□□ -0.09
DDX55-212ENST00000544738 EMC9Q9Y3B6 208 aa14.52□□□□□ -0.09
DDX55-212ENST00000544738 TESMINQ9Y4I5 508 aa14.52□□□□□ -0.09
DDX55-212ENST00000544738 ANK2Q01484 3957 aa14.52□□□□□ -0.09
DDX55-212ENST00000544738 DSCAMO60469 2012 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 UQCRHLA0A096LP55 91 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 DUXAA6NLW8 204 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 C16orf97H3BN30 126 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 ADAMDEC1O15204 470 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 PHF1O43189 567 aaPredicted RBP14.51□□□□□ -0.09
DDX55-212ENST00000544738 AQP8O94778 261 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 SYNGR4O95473 234 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 PLGP00747 810 aaPredicted RBP14.51□□□□□ -0.09
DDX55-212ENST00000544738 PSMA4P25789 261 aaKnown RBP14.51□□□□□ -0.09
DDX55-212ENST00000544738 CTBP2P56545 445 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 ZNF844Q08AG5 666 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 TNK1Q13470 666 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 GUSBP1Q15486 140 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 CHI3L2Q15782 390 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 KLHL26Q53HC5 615 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 DCST2Q5T1A1 773 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 GTF2IRD2BQ6EKJ0 949 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 PPP4R4Q6NUP7 873 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 GTF2IRD2Q86UP8 949 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 ZNF610Q8N9Z0 462 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 OR10D3Q8NH80 312 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 PHOSPHO1Q8TCT1 267 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 ADGRG7Q96K78 797 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 RNF145Q96MT1 663 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 WFIKKN1Q96NZ8 548 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 MED18Q9BUE0 208 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 FANCFQ9NPI8 374 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 GPATCH2Q9NW75 528 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 RAP2CQ9Y3L5 183 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 ABCA1O95477 2261 aa14.51□□□□□ -0.09
DDX55-212ENST00000544738 WDR91A4D1P6 747 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 GTPBP1O00178 669 aaKnown RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 SIAH2O43255 324 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 NUDT14O95848 222 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 TP53P04637 393 aaPredicted RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 IL11P20809 199 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 ELK4P28324 431 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 ADH6P28332 368 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 UGT2B10P36537 528 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 RPL14P50914 215 aaKnown RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 P2RX1P51575 399 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 ATP12AP54707 1039 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 SUMO3P55854 103 aaPredicted RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 ABCE1P61221 599 aaKnown RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 HBA1P69905 142 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 ZNF117Q03924 483 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 CD226Q15762 336 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 CTU2Q2VPK5 515 aaKnown RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 PGS1Q32NB8 556 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 HBMQ6B0K9 141 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 C20orf204Q6ZNR8 217 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 CROCCP2Q86T23 111 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 LILRA2Q8N149 483 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 OR6K3Q8NGY3 331 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 OR2V1Q8NHB1 315 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 PKNOX2Q96KN3 472 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 TIGARQ9NQ88 270 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 PLSCR4Q9NRQ2 329 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 KLHL28Q9NXS3 571 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.5□□□□□ -0.09
DDX55-212ENST00000544738 PCDHGB4Q9UN71 923 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 ACTL7BQ9Y614 415 aa14.5□□□□□ -0.09
DDX55-212ENST00000544738 V9GYY5 206 aaPredicted RBP14.5□□□□□ -0.09
DDX55-212ENST00000544738 GJE1A6NN92 205 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 DEFB108AA8MXU0 73 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 ITM2AO43736 263 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 CXCL13O43927 109 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 AK1P00568 194 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 TUBBP07437 444 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 LINGO3P0C6S8 592 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 PABPC4LP0CB38 370 aaKnown RBP14.49□□□□□ -0.09
DDX55-212ENST00000544738 SOAT1P35610 550 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 CARD18P57730 90 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 PDCD2Q16342 344 aaPredicted RBP14.49□□□□□ -0.09
DDX55-212ENST00000544738 HIPK1Q86Z02 1210 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 LRRC34Q8IZ02 419 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 ZNF781Q8N8C0 355 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 VPS37AQ8NEZ2 397 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 OSTF1Q92882 214 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 REXO5Q96IC2 774 aaKnown RBP14.49□□□□□ -0.09
DDX55-212ENST00000544738 OR7D2Q96RA2 312 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 NPAS1Q99742 590 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 AKTIPQ9H8T0 292 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 YAE1D1Q9NRH1 226 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 ICAM5Q9UMF0 924 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 DTNAQ9Y4J8 743 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 GPC6Q9Y625 555 aaPredicted RBP14.49□□□□□ -0.09
DDX55-212ENST00000544738 KCNE3Q9Y6H6 103 aa14.49□□□□□ -0.09
DDX55-212ENST00000544738 A0A0J9YW62 118 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 RNF223E7ERA6 249 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 RNASET2O00584 256 aaKnown RBP14.48□□□□□ -0.09
DDX55-212ENST00000544738 TNFSF11O14788 317 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 ZNF500O60304 480 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms