RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PHF3Q92576 2039 aaKnown RBP17.62■□□□□ 0.41
DDX55-207ENST00000540763 RP1L1Q8IWN7 2480 aaPredicted RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 ETV2O00321 342 aaPredicted RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 PABPC4LP0CB38 370 aaKnown RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 HK1P19367 917 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 EIF1P41567 113 aaKnown RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 SLC6A8P48029 635 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 PCBP3P57721 371 aaKnown RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 WLSQ5T9L3 541 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 INTS11Q5TA45 600 aaKnown RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 ENPP6Q6UWR7 440 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 ZZZ3Q8IYH5 903 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 ZNF440Q8IYI8 595 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 PM20D2Q8IYS1 436 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 FITM2Q8N6M3 262 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 BHLHE22Q8NFJ8 381 aaPredicted RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 SLC35B4Q969S0 331 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 REXO5Q96IC2 774 aaKnown RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 ZNF607Q96SK3 696 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 PRDM14Q9GZV8 571 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 MED17Q9NVC6 651 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 OSGIN2Q9Y236 505 aa17.61■□□□□ 0.41
DDX55-207ENST00000540763 ZNF443Q9Y2A4 671 aaPredicted RBP17.61■□□□□ 0.41
DDX55-207ENST00000540763 A0A1B0GUH1 482 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 CDHR4A6H8M9 788 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 FAM220BPB1ANY3 271 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 NPIPA2E9PIF3 369 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 NPIPA3F8WFD2 350 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 OIP5O43482 229 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 LINGO3P0C6S8 592 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 UBTFL6P0CB48 400 aaPredicted RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 BMP7P18075 431 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 ADH6P28332 368 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 PRKAR1BP31321 381 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 MNAT1P51948 309 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 B3GALT5-AS1P59052 145 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 EEF1A1P68104 462 aaKnown RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 VEZF1Q14119 521 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 VMACQ2NL98 169 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 EIF2S3LQ2VIR3 472 aaKnown RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 C4orf17Q53FE4 359 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 MRPL2Q5T653 305 aaKnown RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 ARSKQ6UWY0 536 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 GTPBP8Q8N3Z3 284 aaPredicted RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 TMCO5AQ8N6Q1 288 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 PRR7Q8TB68 274 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 GPR119Q8TDV5 335 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 ABTB1Q969K4 478 aaPredicted RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 RELTQ969Z4 430 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 SFXN2Q96NB2 322 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 UGT2B28Q9BY64 529 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 TP63Q9H3D4 680 aaPredicted RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 NDE1Q9NXR1 346 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 DNAJB12Q9NXW2 375 aaKnown RBP17.6■□□□□ 0.41
DDX55-207ENST00000540763 SLC6A5Q9Y345 797 aa17.6■□□□□ 0.41
DDX55-207ENST00000540763 HIVEP3Q5T1R4 2406 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 PRORSD1PA6NEY8 169 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 FIGNL2A6NMB9 653 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 FAAHO00519 579 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 WDR1O75083 606 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 SERPINB7O75635 380 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 NUDT14O95848 222 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 TPOP07202 933 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 HOXD4P09016 255 aaPredicted RBP17.59■□□□□ 0.41
DDX55-207ENST00000540763 GABRA1P14867 456 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 PGCP20142 388 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ELK4P28324 431 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 PTGER4P35408 488 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 DLX5P56178 289 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 PLAURQ03405 335 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 BCL2A1Q16548 175 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 NDUFAF6Q330K2 333 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 SLC25A53Q5H9E4 307 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 RAET1LQ5VY80 246 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ZNF836Q6ZNA1 936 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 PATL1Q86TB9 770 aaKnown RBP17.59■□□□□ 0.41
DDX55-207ENST00000540763 CD163Q86VB7 1156 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 VRK2Q86Y07 508 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 SLC15A3Q8IY34 581 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ST8SIA1Q92185 356 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ZNF583Q96ND8 569 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 TIMP4Q99727 224 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 EVA1AQ9H8M9 152 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ARL8BQ9NVJ2 186 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ABCD2Q9UBJ2 740 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 ACAD8Q9UKU7 415 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 VDAC3Q9Y277 283 aa17.59■□□□□ 0.41
DDX55-207ENST00000540763 OR2M5A3KFT3 312 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 CLDN24A6NM45 220 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 CPN1P15169 458 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 CCR4P51679 360 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 SF3B4Q15427 424 aaKnown RBP eCLIP17.58■□□□□ 0.41e-13■■■■■ 68.7
DDX55-207ENST00000540763 C3AR1Q16581 482 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 GXYLT1Q4G148 440 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 ZNF311Q5JNZ3 666 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 DHRS4L2Q6PKH6 230 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 CCDC80Q76M96 950 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 DOLPP1Q86YN1 238 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 TMEM234Q8WY98 164 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 MRGPRX4Q96LA9 322 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms