RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 A6NL46 340 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 KLK10O43240 276 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 FADS1O60427 444 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 THY1P04216 161 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 FBXO45P0C2W1 286 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 EVI2BP34910 448 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 RYKP34925 604 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 PSMD4P55036 377 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 OR5M10Q6IEU7 315 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 BORAQ6PGQ7 559 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 ZNF605Q86T29 641 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 PHOSPHO1Q8TCT1 267 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 FGF11Q92914 225 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 RDH12Q96NR8 316 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 MBOAT4Q96T53 435 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 FAM117AQ9C073 453 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 CACYBPQ9HB71 228 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 MRTO4Q9UKD2 239 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 SLC9A8Q9Y2E8 581 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 CARD8Q9Y2G2 431 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 COMMD3-BMI1R4GMX3 469 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 SCDO00767 359 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 E2F6O75461 281 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 CSTAP01040 98 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 PRKACGP22612 351 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 ITGA3P26006 1051 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 PLA2G5P39877 138 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 CDH12P55289 794 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 SPIBQ01892 262 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 INPP5JQ15735 1006 aaPredicted RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 ZNF791Q3KP31 576 aaPredicted RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 H3F3CQ6NXT2 135 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 SLC22A8Q8TCC7 542 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 KCNE4Q8WWG9 221 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 SPACA9Q96E40 222 aaPredicted RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 RBM4BQ9BQ04 359 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 RBM4Q9BWF3 364 aaKnown RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
SREK1-209ENST00000520953 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
SREK1-209ENST00000520953 A0A087WXM4 84 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 CCDC160A6NGH7 325 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 H3BSA7 217 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 WISP1O95388 367 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 ICAM2P13598 275 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 HPGDP15428 266 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 ACAA2P42765 397 aaKnown RBP13.77□□□□□ -0.21
SREK1-209ENST00000520953 ID4P47928 161 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 ACER2Q5QJU3 275 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 BEST3Q8N1M1 668 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 PIP5K1AQ99755 562 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.77□□□□□ -0.21
SREK1-209ENST00000520953 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 YARS2Q9Y2Z4 477 aaKnown RBP13.77□□□□□ -0.21
SREK1-209ENST00000520953 SAMHD1Q9Y3Z3 626 aaKnown RBP13.77□□□□□ -0.21
SREK1-209ENST00000520953 LYVE1Q9Y5Y7 322 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 ATMQ13315 3056 aa13.77□□□□□ -0.21
SREK1-209ENST00000520953 G3V3Y1 287 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 HS6ST1O60243 411 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 PTGDSP41222 190 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ZNF117Q03924 483 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 KCNAB2Q13303 367 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 NTRK2Q16620 822 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ENTPD8Q5MY95 495 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 MDGA2Q7Z553 956 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ARMC10Q8N2F6 343 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 SLC5A8Q8N695 610 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 PMM1Q92871 262 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 MCHR1Q99705 422 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 MAN2C1Q9NTJ4 1040 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 FAM118AQ9NWS6 357 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 KLHL28Q9NXS3 571 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 TMEFF2Q9UIK5 374 aaPredicted RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 TRBV4-1A0A0J9YWV2 114 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ALG1L2C9J202 215 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ANGPTL1O95841 491 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 RHCEP18577 417 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 ELK4P28324 431 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 SSR4P51571 173 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 SKP2Q13309 424 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 SEC23BQ15437 767 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 EXOC3L2Q2M3D2 409 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 EIPR1Q53HC9 387 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 SHQ1Q6PI26 577 aaKnown RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 FAM71CQ8NEG0 241 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 OR4C15Q8NGM1 316 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 TBL1XR1Q9BZK7 514 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 HOXD1Q9GZZ0 328 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 ATP13A2Q9NQ11 1180 aa13.76□□□□□ -0.21
SREK1-209ENST00000520953 CHCHD2Q9Y6H1 151 aaPredicted RBP13.76□□□□□ -0.21
SREK1-209ENST00000520953 CCL3P10147 92 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 UBL4AP11441 157 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 CCR4P51679 360 aa13.75□□□□□ -0.21
SREK1-209ENST00000520953 GAS1P54826 345 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms