RNA–Protein interactions for RNA: ENST00000509638.5

LIMCH1-211, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-211ENST00000509638 DPP4P27487 766 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 KDELR2P33947 212 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 SUMO3P55854 103 aaPredicted RBP26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 GANABQ14697 944 aaKnown RBP26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 FXNQ16595 210 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 GLIPR1L2Q4G1C9 344 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 DTNBP1Q96EV8 351 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 PINK1Q9BXM7 581 aa26.92■■□□□ 1.9
LIMCH1-211ENST00000509638 CDC40O60508 579 aaKnown RBP eCLIP26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 TCEA1P23193 301 aaKnown RBP26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 SRD5A2P31213 254 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 DSCR4P56555 118 aaPredicted RBP26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 NCALDP61601 193 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 ZSWIM7Q19AV6 140 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 ARSKQ6UWY0 536 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 FAM83FQ8NEG4 500 aaPredicted RBP26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 TOR1AIP2Q8NFQ8 470 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 BARD1Q99728 777 aaKnown RBP26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 SLX1AQ9BQ83 275 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 DEFB127Q9H1M4 99 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 LIPGQ9Y5X9 500 aa26.91■■□□□ 1.9
LIMCH1-211ENST00000509638 RP1L1Q8IWN7 2480 aaPredicted RBP26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 ANKUB1A6NFN9 424 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 HPNP05981 417 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 CD247P20963 164 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 DUSP7Q16829 419 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 GRAMD2AQ8IUY3 354 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 BHLHE22Q8NFJ8 381 aaPredicted RBP26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 OR5W2Q8NH69 310 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 FAM162AQ96A26 154 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 CCDC124Q96CT7 223 aaKnown RBP26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 PCDHAC1Q9H158 963 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 LRMDAQ9H2I8 198 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 MAGEL2Q9UJ55 1249 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 VDAC3Q9Y277 283 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 NBASA2RRP1 2371 aa26.9■■□□□ 1.9
LIMCH1-211ENST00000509638 MED12Q93074 2177 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 FRS3O43559 492 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 ADAM11O75078 769 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 DNAJC8O75937 253 aaPredicted RBP26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 WISP2O76076 250 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 EPPINO95925 133 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 ZNF41P51814 821 aaPredicted RBP26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 BNIP2Q12982 314 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 CBFBQ13951 182 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 CYBRD1Q53TN4 286 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 PRICKLE2Q7Z3G6 844 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 YRDCQ86U90 279 aaKnown RBP26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 GPR32P1Q8NGA4 272 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 RASSF5Q8WWW0 418 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 OR2B2Q9GZK3 357 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 SLC6A15Q9H2J7 730 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 TAS2R10Q9NYW0 307 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 SLC13A4Q9UKG4 626 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 SNX13Q9Y5W8 968 aa26.89■■□□□ 1.9
LIMCH1-211ENST00000509638 ZNF462Q96JM2 2506 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 B8ZZF3 427 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 ARPC2O15144 300 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 GMNNO75496 209 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 IFNA14P01570 189 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 RYKP34925 604 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 TDGF1P3P51864 188 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 SLC10A1Q14973 349 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 GLYATQ6IB77 296 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 SPPL2CQ8IUH8 684 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 OR14L1PQ8NHC6 308 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 GPR137Q96N19 417 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 MED17Q9NVC6 651 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 GKN3PP0CG01 181 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 ME2P23368 584 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 KCNJ5P48544 419 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 WIPI1Q5MNZ9 446 aaPredicted RBP26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 ZNF440Q8IYI8 595 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 MCUR1Q96AQ8 359 aa26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 CADM1Q9BY67 442 aaKnown RBP26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 RPH3AQ9Y2J0 694 aaPredicted RBP26.88■■□□□ 1.89
LIMCH1-211ENST00000509638 FAM47E-STBD1D6RA91 191 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 AP3D1O14617 1153 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 SERPINA1P01009 418 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 HK1P19367 917 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 SLC6A8P48029 635 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 TOMM34Q15785 309 aaPredicted RBP26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 PLPPR5Q32ZL2 321 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 GPR119Q8TDV5 335 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 ACKR4Q9NPB9 350 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 KLHL28Q9NXS3 571 aa26.87■■□□□ 1.89
LIMCH1-211ENST00000509638 CFAP73A6NFT4 308 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 SYT5O00445 386 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 EPS8Q12929 822 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 RAET1LQ5VY80 246 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 LDAHQ9H6V9 325 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 BAG5Q9UL15 447 aa26.86■■□□□ 1.89
LIMCH1-211ENST00000509638 A0A087WZY1 265 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 GSC2O15499 205 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 ZIC3O60481 467 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 ZNF682O95780 498 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 IGHG3P01860 377 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 FESP07332 822 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 LINGO3P0C6S8 592 aa26.85■■□□□ 1.89
LIMCH1-211ENST00000509638 PRG2P13727 222 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms