RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GKAP1Q5VSY0 366 aaPredicted RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 CBLN3Q6UW01 205 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 B3GNT6Q6ZMB0 384 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SLC30A8Q8IWU4 369 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ZNF440Q8IYI8 595 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 GTPBP8Q8N3Z3 284 aaPredicted RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 C11orf65Q8NCR3 313 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 FAM71CQ8NEG0 241 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 OR52P1PQ8NH57 321 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ZPLD1Q8TCW7 415 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 TMEM234Q8WY98 164 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 MAL2Q969L2 176 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 WDYHV1Q96HA8 205 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 CCDC120Q96HB5 630 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 DMRTA2Q96SC8 542 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 MYLK2Q9H1R3 596 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 IKZF5Q9H5V7 419 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ADAM21Q9UKJ8 722 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ANGPT4Q9Y264 503 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 AP4B1Q9Y6B7 739 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 MYO7BQ6PIF6 2116 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 HIVEP3Q5T1R4 2406 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 CENPVL1A0A0U1RR11 272 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 OR2M5A3KFT3 312 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 H0Y3Z8 333 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 PGM3O95394 542 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 COX4I1P13073 169 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 UQCRBP14927 111 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 ZNF708P17019 499 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 POU3F2P20265 443 aaPredicted RBP13.57□□□□□ -0.24
RNF4-210ENST00000508235 PRDX6P30041 224 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 LHX2P50458 406 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 MTPNP58546 118 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 SCARB2Q14108 478 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
RNF4-210ENST00000508235 TMEM44Q2T9K0 475 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 NDUFAF6Q330K2 333 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 NANOGP8Q6NSW7 305 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 XKRXQ6PP77 449 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 C3P1Q6ZMU1 363 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 RND1Q92730 232 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 MRGPRX4Q96LA9 322 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 LRRC37BQ96QE4 947 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 ZNF607Q96SK3 696 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 ECSITQ9BQ95 431 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 KAT8Q9H7Z6 458 aaKnown RBP13.57□□□□□ -0.24
RNF4-210ENST00000508235 NANOGQ9H9S0 305 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 EFCAB1Q9HAE3 211 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 AP3M1Q9Y2T2 418 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 HEATR5AQ86XA9 2040 aa13.57□□□□□ -0.24
RNF4-210ENST00000508235 H3BML4 177 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 DNAJA2O60884 412 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 SHOX2O60902 331 aaPredicted RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 SERPINB7O75635 380 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 EPPINO95925 133 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 LINGO3P0C6S8 592 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 AGAP20933 346 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 ME2P23368 584 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 ELK4P28324 431 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 SRYQ05066 204 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 DCST1Q5T197 706 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 ZNF808Q8N4W9 903 aaPredicted RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 POU5F2Q8N7G0 328 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 ST8SIA1Q92185 356 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 RCN3Q96D15 328 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 TTYH2Q9BSA4 534 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 COQ3Q9NZJ6 369 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 ZNF337Q9Y3M9 751 aa13.56□□□□□ -0.24
RNF4-210ENST00000508235 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
RNF4-210ENST00000508235 PRRC2CQ9Y520 2896 aaKnown RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 GJE1A6NN92 205 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 FXYD1O00168 92 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 OIP5O43482 229 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 ZG16O60844 167 aa13.55□□□□□ -0.24
RNF4-210ENST00000508235 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
RNF4-210ENST00000508235 PRKCAP17252 672 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms