RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TMCO5AQ8N6Q1 288 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 CLEC18CQ8NCF0 446 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 FAM71CQ8NEG0 241 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 OR5M9Q8NGP3 310 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 OR52P1PQ8NH57 321 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 OR5W2Q8NH69 310 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ARSGQ96EG1 525 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 VKORC1Q9BQB6 163 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SPATA9Q9BWV2 254 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ARMC7Q9H6L4 198 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 EXOSC3Q9NQT5 275 aaKnown RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 PNPLA3Q9NST1 481 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 MED17Q9NVC6 651 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ERRFI1Q9UJM3 462 aaPredicted RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF232Q9UNY5 417 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 VDAC3Q9Y277 283 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 IFT52Q9Y366 437 aa9.81□□□□□ -0.84
ATG4B-219ENST00000479941 SPTAN1Q13813 2472 aaKnown RBP9.81□□□□□ -0.84
ATG4B-219ENST00000479941 DIDO1Q9BTC0 2240 aaKnown RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 USP9YO00507 2555 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 OR2M5A3KFT3 312 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 AHRRA9YTQ3 701 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 AIM2O14862 343 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 OIP5O43482 229 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 DNAJA2O60884 412 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 SEMA7AO75326 666 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 CYP7B1O75881 506 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 LINGO3P0C6S8 592 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 UBTFL6P0CB48 400 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PEPDP12955 493 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 CPN1P15169 458 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PGCP20142 388 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 TCEA1P23193 301 aaKnown RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ACVR2AP27037 513 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ADH6P28332 368 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 SLC6A8P48029 635 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 CCR4P51679 360 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 B3GALT5-AS1P59052 145 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 SRSF1Q07955 248 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ART3Q13508 389 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 LARS2Q15031 903 aaKnown RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PLPPR5Q32ZL2 321 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 NDUFAF6Q330K2 333 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 RPS26P11Q5JNZ5 115 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 FAM91A1Q658Y4 838 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 TMEM211Q6ICI0 200 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF585AQ6P3V2 769 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 HACD2Q6Y1H2 254 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 NET1Q7Z628 596 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ARPINQ7Z6K5 226 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 HMGN2P46Q86SG4 172 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 KRT73Q86Y46 540 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 GRAMD2AQ8IUY3 354 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 SLC30A8Q8IWU4 369 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ULK2Q8IYT8 1036 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 GTPBP8Q8N3Z3 284 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 C11orf65Q8NCR3 313 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 CCDC197Q8NCU1 140 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 HIPK4Q8NE63 616 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 OR10A6Q8NH74 314 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 NFKBIDQ8NI38 313 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 GPR119Q8TDV5 335 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PHF10Q8WUB8 498 aaKnown RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 WDYHV1Q96HA8 205 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF607Q96SK3 696 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 HOPXQ9BPY8 73 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ECSITQ9BQ95 431 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 SPATA5L1Q9BVQ7 753 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 TRIM8Q9BZR9 551 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ALKBH4Q9NXW9 302 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 STOML1Q9UBI4 398 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PRDM4Q9UKN5 801 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ANGPT4Q9Y264 503 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 AP3M1Q9Y2T2 418 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF337Q9Y3M9 751 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 GPC6Q9Y625 555 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-219ENST00000479941 AP4B1Q9Y6B7 739 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 MYO7BQ6PIF6 2116 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 MED12Q93074 2177 aa9.8□□□□□ -0.84
ATG4B-219ENST00000479941 PCNX3Q9H6A9 2034 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 CDHR4A6H8M9 788 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 CLDN24A6NM45 220 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ETV2O00321 342 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 SERPINB7O75635 380 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 PABPC4LP0CB38 370 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 UQCRBP14927 111 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF708P17019 499 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 POU3F2P20265 443 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 LHX2P50458 406 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 EEFSECP57772 596 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 RABL3Q5HYI8 236 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 ZNF311Q5JNZ3 666 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 DCST1Q5T197 706 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 MRPL2Q5T653 305 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 INTS11Q5TA45 600 aaKnown RBP9.79□□□□□ -0.84
ATG4B-219ENST00000479941 RNF220Q5VTB9 566 aa9.79□□□□□ -0.84
ATG4B-219ENST00000479941 B3GNT6Q6ZMB0 384 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms