RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 DMGDHQ9UI17 866 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 MRTO4Q9UKD2 239 aaKnown RBP4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 KCNS2Q9ULS6 477 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 TMCO1Q9UM00 188 aa4.53□□□□□ -1.68
SNRNP40-204ENST00000474025 IGHV3-15A0A0B4J1V0 119 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 TTC36A6NLP5 189 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 A8MT66 165 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 VWC2LB2RUY7 222 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 RAD51CO43502 376 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 EFNA2O43921 213 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 SMIM24O75264 130 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 LY6HO94772 140 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PRKD3O94806 890 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 KCNH1O95259 989 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PGM3O95394 542 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 KRT6AP02538 564 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 KRT6BP04259 564 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 YES1P07947 543 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ANXA4P09525 319 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 IFI6P09912 130 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 CSF3P09919 207 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 SBK3P0C264 359 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 LINGO3P0C6S8 592 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 DHRS4L1P0CG22 281 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GGT1P19440 569 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 HNF1AP20823 631 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 IGHV1-2P23083 117 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 NTSP30990 170 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GABRA3P34903 492 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 HSD17B3P37058 310 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GSTM5P46439 218 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 KRT6CP48668 564 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PRIM2P49643 509 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 HTR6P50406 440 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF41P51814 821 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 EFNA4P52798 201 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PLTPP55058 493 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GUCY2DQ02846 1103 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 CLCQ05315 142 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ACSM2AQ08AH3 577 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF763Q0D2J5 394 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 FOXF1Q12946 379 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC29A2Q14542 456 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 RAB35Q15286 201 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 CD226Q15762 336 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 UAP1Q16222 522 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 TIMM23BQ5SRD1 257 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 UBAP2Q5T6F2 1119 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ACSM2BQ68CK6 577 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 FAM71E1Q6IPT2 247 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 TMEM108Q6UXF1 575 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 C12orf54Q6X4T0 127 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 Q6ZSR9 355 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 FCRLAQ7L513 359 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 SSX8Q7RTT4 187 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 P2RY8Q86VZ1 359 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 MEX3DQ86XN8 651 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 FBXL14Q8N1E6 418 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 SLC43A2Q8N370 569 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 FBXO25Q8TCJ0 367 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ZFP90Q8TF47 636 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 HOXB13Q92826 284 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 MSI2Q96DH6 328 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 MUCL1Q96DR8 90 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ELP4Q96EB1 424 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 C1orf159Q96HA4 380 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 REXO5Q96IC2 774 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 RADILQ96JH8 1075 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ZNF382Q96SR6 550 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PSD2Q9BQI7 771 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 EBPLQ9BY08 206 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ADAM19Q9H013 955 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 CXorf36Q9H7Y0 433 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 C3orf14Q9HBI5 128 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 EML4Q9HC35 981 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 HHATLQ9HCP6 504 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 EQTNQ9NQ60 294 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 TIGARQ9NQ88 270 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 TAS2R7Q9NYW3 318 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 KLHL9Q9P2J3 617 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 PRSS50Q9UI38 385 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 POU2F3Q9UKI9 436 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GRID1Q9ULK0 1009 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 GPC6Q9Y625 555 aaPredicted RBP4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
SNRNP40-204ENST00000474025 ARFGEF3Q5TH69 2177 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 IGHV4-61A0A0C4DH41 118 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 LOC100289279A0A1B0GTE1 492 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 SERINC4A6NH21 518 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 OR5H1A6NKK0 313 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 GJE1A6NN92 205 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 KIF2AO00139 706 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 ZSCAN12O43309 604 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 KCNAB3O43448 404 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 RGS14O43566 566 aa4.51□□□□□ -1.69
SNRNP40-204ENST00000474025 KIAA0513O60268 411 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms