RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CECR9P0C854 216 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 NAT2P11245 290 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CD22P20273 847 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 MYF6P23409 242 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 KRT20P35900 424 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 IER3P46695 156 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ATP5OP48047 213 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ACVR1Q04771 509 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 HEPACAMQ14CZ8 416 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 HFEQ30201 348 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 GRAMD1BQ3KR37 738 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 HIKESHIQ53FT3 197 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ODF2Q5BJF6 829 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 GPR157Q5UAW9 335 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ANKRD16Q6P6B7 361 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 TMIGD1Q6UXZ0 262 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ZNF571Q7Z3V5 609 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 VN1R5Q7Z5H4 357 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 UBE3DQ7Z6J8 389 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 VSIG1Q86XK7 387 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CPNE9Q8IYJ1 553 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 GTPBP8Q8N3Z3 284 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CDYL2Q8N8U2 506 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 NEK11Q8NG66 645 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 OR52E4Q8NGH9 312 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ZNF75CPQ92670 426 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 APH1AQ96BI3 265 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 EFHD2Q96C19 240 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ARL5BQ96KC2 179 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 PKNOX2Q96KN3 472 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 PPP1R2P1Q96PQ5 205 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CITED2Q99967 270 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 ZMAT4Q9H898 229 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 PARVBQ9HBI1 364 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 PPANQ9NQ55 473 aaKnown RBP5.51□□□□□ -1.53
HDAC3-206ENST00000471968 SDHAF3Q9NRP4 125 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CFL2Q9Y281 166 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 EFR3BQ9Y2G0 817 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CMAHPQ9Y471 501 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 CACNG2Q9Y698 323 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 A0A1W2PRX2 142 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 ANKRD61A6NGH8 418 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 TO15178 435 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 SH3BGRLO75368 114 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 PF4V1P10720 104 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 S1PR1P21453 382 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 DRD5P21918 477 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 TGFBR2P37173 567 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 SSR2P43308 183 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MAGEA8P43361 318 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 RNF144AP50876 292 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MMP16P51512 607 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MANFP55145 182 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 SEC61A1P61619 476 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 CCL8P80075 99 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 DGCR2P98153 550 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 SNTB2Q13425 540 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 TFDP2Q14188 446 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 SLBPQ14493 270 aaKnown RBP eCLIP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 EXOSC7Q15024 291 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 TRIP13Q15645 432 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MSMPQ1L6U9 139 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 CLEC6AQ6EIG7 209 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 KRT80Q6KB66 452 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 UGT3A1Q6NUS8 523 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 C11orf88Q6PI97 169 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MPP5Q8N3R9 675 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 C1orf162Q8NEQ5 155 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 LRTOMTQ8WZ04 291 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 DNAJC7Q99615 494 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 GPR61Q9BZJ8 451 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 ISCUQ9H1K1 167 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 VPS11Q9H270 941 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 HAUS4Q9H6D7 363 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 PRM3Q9NNZ6 103 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 LYARQ9NX58 379 aaKnown RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MS4A12Q9NXJ0 267 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 OR5V1Q9UGF6 321 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 POLR3KQ9Y2Y1 108 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-206ENST00000471968 PLLPQ9Y342 182 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
HDAC3-206ENST00000471968 IGHV1-69-2A0A0G2JMI3 117 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 ZNF724A8MTY0 619 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 H0YHG0 523 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 RNASEK-C17orf49H0YIS7 233 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 H2AFYO75367 372 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 HIST1H2AGP0C0S8 130 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 HIST1H2ADP20671 130 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 PSMA4P25789 261 aaKnown RBP5.49□□□□□ -1.53
HDAC3-206ENST00000471968 PPICP45877 212 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 EVX1P49640 407 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 VEGFCP49767 419 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 GNB2P62879 340 aa5.49□□□□□ -1.53
HDAC3-206ENST00000471968 TEKQ02763 1124 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms