RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-208	ENST00000470171	CPNE4	Q96A23	557 aa	Predicted RBP	13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	INTS12	Q96CB8	462 aa	Known RBP	13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	OR52B2	Q96RD2	323 aa		13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	PRRG4	Q9BZD6	226 aa		13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	ELOVL5	Q9NYP7	299 aa		13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	CARD8	Q9Y2G2	431 aa		13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	L3MBTL1	Q9Y468	752 aa		13.91	□□□□□ -0.18
FDPS-208	ENST00000470171	GTF3C1	Q12789	2109 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171		A0A1W2PNV4	684 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	HMGN4	O00479	90 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	FCMR	O60667	390 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	IL11	P20809	199 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	CLK1	P49759	484 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	IDH3A	P50213	366 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	NME5	P56597	212 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	RPS26	P62854	115 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	FADD	Q13158	208 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	MYBPH	Q13203	477 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	SELENBP1	Q13228	472 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	DAZAP2	Q15038	168 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	RNPS1	Q15287	305 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	GPAT3	Q53EU6	434 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	PDZK1	Q5T2W1	519 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	PRAMEF8	Q5VWM4	474 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	PRAMEF7	Q5VXH5	474 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	TYW3	Q6IPR3	259 aa	Known RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	MAVS	Q7Z434	540 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	ZNF440	Q8IYI8	595 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	LILRA2	Q8N149	483 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	SLC43A2	Q8N370	569 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	ZNF614	Q8N883	585 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	GATS	Q8NAP1	163 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	ZBTB9	Q96C00	473 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	OTUB1	Q96FW1	271 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	KLHL15	Q96M94	604 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	RNF145	Q96MT1	663 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	PINK1	Q9BXM7	581 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	SERHL2	Q9H4I8	314 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	P2RX2	Q9UBL9	471 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	CORO2B	Q9UQ03	480 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	EMC9	Q9Y3B6	208 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	GMEB1	Q9Y692	573 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	NAV2	Q8IVL1	2488 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	ADGRG4	Q8IZF6	3080 aa		13.9	□□□□□ -0.18
FDPS-208	ENST00000470171	ZNF407	Q9C0G0	2248 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	TUBAL3	A6NHL2	446 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171		A8MXE2	369 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	FAAH	O00519	579 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	EIF1AY	O14602	144 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	SEC14L5	O43304	696 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	EEF1E1	O43324	174 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	NTN1	O95631	604 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	TGM6	O95932	706 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	DBI	P07108	87 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	SNRPB2	P08579	225 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	PRF1	P14222	555 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	PRKCA	P17252	672 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	APOBEC1	P41238	236 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	EIF1AX	P47813	144 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	CPA2	P48052	419 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	SUCLG1	P53597	346 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	CRISP3	P54108	245 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	AQP5	P55064	265 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	CARD18	P57730	90 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	KCNJ10	P78508	379 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	SKP2	Q13309	424 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	PON3	Q15166	354 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	HSP90B2P	Q58FF3	399 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	FAM214B	Q7L5A3	538 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	GGN	Q86UU5	652 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	RNF130	Q86XS8	419 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	PEX5L	Q8IYB4	626 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	FAM71C	Q8NEG0	241 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	ZFP90	Q8TF47	636 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	TSPEAR	Q8WU66	669 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	ADGRG7	Q96K78	797 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	LURAP1	Q96LR2	239 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	DACH2	Q96NX9	599 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	RBM24	Q9BX46	236 aa	Known RBP	13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	TPT1P8	Q9HAU6	139 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	NDRG3	Q9UGV2	375 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	MKLN1	Q9UL63	735 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	CRYBG3	Q68DQ2	2970 aa		13.89	□□□□□ -0.19
FDPS-208	ENST00000470171	TEX15	Q9BXT5	2789 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	AGAP5	A6NIR3	686 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	TNFSF13	O75888	250 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	H6PD	O95479	791 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	PLG	P00747	810 aa	Predicted RBP	13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	NR2F1	P10589	423 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	EPX	P11678	715 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	PGM1	P36871	562 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	CLDN20	P56880	219 aa		13.88	□□□□□ -0.19
FDPS-208	ENST00000470171	SQLE	Q14534	574 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms