RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 SMPDL3BQ92485 455 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 MAL2Q969L2 176 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 RELTQ969Z4 430 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 SARAFQ96BY9 339 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 C1GALT1C1Q96EU7 318 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 SLC39A3Q9BRY0 314 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 SLC38A1Q9H2H9 487 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 TP63Q9H3D4 680 aaPredicted RBP7.57□□□□□ -1.2
BRCC3-205ENST00000399026 ACKR4Q9NPB9 350 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 SDHAF3Q9NRP4 125 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 ALKBH4Q9NXW9 302 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 P2RX2Q9UBL9 471 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 SUCOQ9UBS9 1254 aaKnown RBP7.57□□□□□ -1.2
BRCC3-205ENST00000399026 MEMO1Q9Y316 297 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 NDUFAF1Q9Y375 327 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 FAM215AQ9Y5M1 114 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 PTPN13Q12923 2485 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 GTF3C1Q12789 2109 aa7.57□□□□□ -1.2
BRCC3-205ENST00000399026 NCOA6Q14686 2063 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 COL12A1Q99715 3063 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 DOPEY1Q5JWR5 2465 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 IGLV3-32A0A0A0MS00 114 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 A0A1B0GUH1 482 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 OR14I1A6ND48 311 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SERINC4A6NH21 518 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 H0Y3Z8 333 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 MRASO14807 208 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 BCKDKO14874 412 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SEC14L5O43304 696 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 NUDT14O95848 222 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 UBTFL6P0CB48 400 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 POU3F2P20265 443 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 GCKP35557 465 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF41P51814 821 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 GFRA1P56159 465 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 B3GALT5-AS1P59052 145 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SRYQ05066 204 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 C17orf67Q0P5P2 114 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 FADDQ13158 208 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SKP2Q13309 424 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 FGFBP1Q14512 234 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 GANABQ14697 944 aaKnown RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TOMM34Q15785 309 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF141Q15928 474 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF630Q2M218 657 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TRMT5Q32P41 509 aaKnown RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 PLPPR5Q32ZL2 321 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 GXYLT1Q4G148 440 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 KLHL26Q53HC5 615 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 C1orf185Q5T7R7 199 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 WLSQ5T9L3 541 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 METTL21CQ5VZV1 264 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 RTL6Q6ICC9 239 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SHISA2Q6UWI4 295 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 DLEU7Q6UYE1 221 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 LRRC74BQ6ZQY2 392 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TREML1Q86YW5 311 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 MISPQ8IVT2 679 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ULK2Q8IYT8 1036 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 UBQLNLQ8IYU4 475 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 NFKBIDQ8NI38 313 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 WDR60Q8WVS4 1066 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ABTB1Q969K4 478 aaPredicted RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ZG16BQ96DA0 208 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TMEM19Q96HH6 336 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 RNF145Q96MT1 663 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TRNT1Q96Q11 434 aaKnown RBP7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TIMP4Q99727 224 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 HOXD1Q9GZZ0 328 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 SAP130Q9H0E3 1048 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 RAD21L1Q9H4I0 556 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TMEM185BQ9H7F4 350 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 PTGES2Q9H7Z7 377 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 MED17Q9NVC6 651 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 TMEM45AQ9NWC5 275 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 FRRS1LQ9P0K9 344 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 DTNAQ9Y4J8 743 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 ARHGAP21Q5T5U3 1957 aa7.56□□□□□ -1.2
BRCC3-205ENST00000399026 DOPEY2Q9Y3R5 2298 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 HECTD1Q9ULT8 2610 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 OR2M5A3KFT3 312 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 GMNCA6NCL1 334 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 FAM47E-STBD1D6RA91 191 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 H0YC42 278 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 H3BNH8 94 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 FXYD1O00168 92 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 GTPBP1O00178 669 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ZNF264O43296 627 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ZIC3O60481 467 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 SNX3O60493 162 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 KRT34O76011 436 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 SOX30O94993 753 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 CSTAP01040 98 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 OPN1LWP04000 364 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 RPS4Y1P22090 263 aaKnown RBP7.55□□□□□ -1.2
BRCC3-205ENST00000399026 ACVR2AP27037 513 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 AQP1P29972 269 aa7.55□□□□□ -1.2
BRCC3-205ENST00000399026 LHX2P50458 406 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms