RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CD63P08962 238 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 RAB40ALP0C0E4 278 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 F8A1P23610 371 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 IFNA8P32881 189 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 IFNGR2P38484 337 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 GP2P55259 537 aaKnown RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 PLAURQ03405 335 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 SLC25A30Q5SVS4 291 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 SYT6Q5T7P8 510 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 FAAH2Q6GMR7 532 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 QSOX2Q6ZRP7 698 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 MRGPREQ86SM8 312 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 GRAMD2AQ8IUY3 354 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF615Q8N8J6 731 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF540Q8NDQ6 660 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 OR2Y1Q8NGV0 311 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 C12orf43Q96C57 262 aaKnown RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 COG8Q96MW5 612 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 GPR87Q9BY21 358 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 GPN2Q9H9Y4 310 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 IMPAD1Q9NX62 359 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 TCFL5Q9UL49 500 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 GXYLT2A0PJZ3 443 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CLCA1A8K7I4 914 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 MT-ND2P03891 347 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CLPSP04118 112 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 FOLR3P41439 243 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 OMPP47874 163 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 EFNA3P52797 238 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 EMP2P54851 167 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 RHAGQ02094 409 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 ZNHIT3Q15649 155 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 NSDHLQ15738 373 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 GPR68Q15743 365 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 ZSWIM7Q19AV6 140 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 OR7G1Q8NGA0 311 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 DOK4Q8TEW6 326 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 OIT3Q8WWZ8 545 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 TSLPQ969D9 159 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 MCHR1Q99705 422 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 GPA33Q99795 319 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 BCL7BQ9BQE9 202 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 MRPS18BQ9Y676 258 aaKnown RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CLDN24A6NM45 220 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF99A8MXY4 864 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 HRKO00198 91 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 DRD5P21918 477 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 SSTR4P31391 388 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 SLC15A1P46059 708 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 EFNB1P98172 346 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 TSPAN31Q12999 210 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 TBCEQ15813 527 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 GPR107Q5VW38 600 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 NPSR1Q6W5P4 371 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 GDF7Q7Z4P5 450 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 VASH2Q86V25 355 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 RANBP3LQ86VV4 465 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 RAB2BQ8WUD1 216 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 METTL21AQ8WXB1 218 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 ACOT13Q9NPJ3 140 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 NECTIN3Q9NQS3 549 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CNOT2Q9NZN8 540 aaKnown RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 TESQ9UGI8 421 aaKnown RBP13.92□□□□□ -0.18
SCAF11-204ENST00000395454 IL17BQ9UHF5 180 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
SCAF11-204ENST00000395454 CPSF4LA6NMK7 179 aaKnown RBP13.91□□□□□ -0.18
SCAF11-204ENST00000395454 PEX12O00623 359 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 TERTO14746 1132 aaKnown RBP13.91□□□□□ -0.18
SCAF11-204ENST00000395454 TLX3O43711 291 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-204ENST00000395454 LYPD3O95274 346 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CDK1P06493 297 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 UMODP07911 640 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CT45A8P0DMV1 189 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CT45A9P0DMV2 189 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
SCAF11-204ENST00000395454 LIFP15018 202 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 FPR3P25089 353 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 LSM11P83369 360 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CDK5Q00535 292 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CLN3Q13286 438 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF141Q15928 474 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 CT45A2Q5DJT8 189 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 UBE2UQ5VVX9 321 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 PLEKHM3Q6ZWE6 761 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 ZAR1Q86SH2 424 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 POGLUT1Q8NBL1 392 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF248Q8NDW4 579 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 GNPDA2Q8TDQ7 276 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 KCNE4Q8WWG9 221 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 SLC41A3Q96GZ6 507 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 COPS4Q9BT78 406 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 PRR14Q9BWN1 585 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
SCAF11-204ENST00000395454 DTX4Q9Y2E6 619 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms