RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TCEAL2Q9H3H9 227 aaPredicted RBP11.4□□□□□ -0.59
PCF11-201ENST00000298281 NCBP2LA6PVI3 153 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 C12orf71A8MTZ7 269 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 LEFTY1O75610 366 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PIN1Q13526 163 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 PHYHD1Q5SRE7 291 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 KCTD20Q7Z5Y7 419 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 UMODL1-AS1Q8N2C9 162 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 FOLH1BQ9HBA9 442 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 TMEM265A0A087WTH1 108 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 GDF1P27539 372 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PI4KAP42356 2102 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 BAXQ07812 192 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 GK3PQ14409 553 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PON2Q15165 354 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CCL14Q16627 93 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 EMC10Q5UCC4 262 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 MANEALQ5VSG8 457 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CES4AQ5XG92 561 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 M1APQ8TC57 530 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 TEPSINQ96N21 525 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 ZNF317Q96PQ6 595 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 CNN2Q99439 309 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 VPS25Q9BRG1 176 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PECRQ9BY49 303 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 ARL2-SNX15V9GYD0 113 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 A0A1W2PS29 197 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 HTRA2O43464 458 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 SLC22A6Q4U2R8 563 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 C9orf135Q5VTT2 229 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CSNK1A1LQ8N752 337 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 KDM1BQ8NB78 822 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 FGGYQ96C11 551 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SLC38A1Q9H2H9 487 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 C8orf33Q9H7E9 229 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 PORP16435 677 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 TBPP20226 339 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 XCR1P46094 333 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 GRM7Q14831 915 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 MSMO1Q15800 293 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 FAM217AQ8IXS0 508 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 IL17RDQ8NFM7 739 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 OR52P1PQ8NH57 321 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CMTM3Q96MX0 182 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SMG9Q9H0W8 520 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 MTCH1Q9NZJ7 389 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 OSGIN2Q9Y236 505 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 PCDHA9Q9Y5H5 950 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 H3BSA7 217 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CKMT1AP12532 417 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 MAP2K3P46734 347 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 SQSTM1Q13501 440 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 COQ5Q5HYK3 327 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 TXNDC5Q8NBS9 432 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 APH1AQ96BI3 265 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CPEB1Q9BZB8 566 aaKnown RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 DOCK9Q9BZ29 2069 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 C4orf47A7E2U8 309 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 RASAL1O95294 804 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
PCF11-201ENST00000298281 DCAF12L1Q5VU92 463 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 B3GLCTQ6Y288 498 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 ASRGL1Q7L266 308 aa11.39□□□□□ -0.59
PCF11-201ENST00000298281 C17orf112F2Z3M2 114 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TCEAL1Q15170 157 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SLC22A10Q63ZE4 541 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 HDHD5Q9BXW7 423 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SCML1Q9UN30 329 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 FUOMA2VDF0 154 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 PIRO00625 290 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 JRKO75564 520 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 GAAP10253 952 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 LINC00597Q9H2U6 94 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 KIF25Q9UIL4 384 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TRAPPC2LQ9UL33 140 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 GOSR1O95249 250 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 AMTP48728 403 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SLC14A1Q13336 389 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SNTB2Q13425 540 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 SPHARQ15513 63 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 HLA-CQ95604 372 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 ACTRT3Q9BYD9 372 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SLC25A31Q9H0C2 315 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 WDR6Q9NNW5 1121 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 P4HTMQ9NXG6 502 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 PTRH2Q9Y3E5 179 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 A0A0D9SG52 128 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms