RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 ACTR6Q9GZN1 396 aa16.05■□□□□ 0.16
SLC1A4-201ENST00000234256 GDE1Q9NZC3 331 aa16.05■□□□□ 0.16
SLC1A4-201ENST00000234256 PRELID1Q9Y255 219 aa16.05■□□□□ 0.16
SLC1A4-201ENST00000234256 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
SLC1A4-201ENST00000234256 PRSS38A1L453 326 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SEC14L5O43304 696 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 RBMXP38159 391 aaKnown RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 LINC01599Q8WXQ3 324 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 RHNO1Q9BSD3 238 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC6A17Q9H1V8 727 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 ASB6Q9NWX5 421 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 ABI3Q9P2A4 366 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 KLHL9Q9P2J3 617 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 C14orf166Q9Y224 244 aaKnown RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 C17orf113A0A1B0GUU1 675 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 GPR75O95800 540 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SNU13P55769 128 aaKnown RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 RPS25P62851 125 aaKnown RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 PCGF3Q3KNV8 242 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 CFAP77Q6ZQR2 320 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 MCATQ8IVS2 390 aaKnown RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC35F2Q8IXU6 374 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC7A13Q8TCU3 470 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 CPNE7Q9UBL6 633 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SNX11Q9Y5W9 270 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 DUX1O43812 170 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 CACNG3O60359 315 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 INAVAQ3KP66 663 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 GXYLT1Q4G148 440 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 THRSPQ92748 146 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 SCGB3A2Q96PL1 93 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 LPAR4Q99677 370 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 PRSS16Q9NQE7 514 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 C19orf25Q9UFG5 118 aaPredicted RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 HMX3A6NHT5 357 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 TEX46H3BTG2 121 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 M0R036 132 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 PLPP1O14494 284 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 KCNJ13O60928 360 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 ACP2P11117 423 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 CPMP14384 443 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 HOXD12P35452 270 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 HNRNPKP61978 463 aaKnown RBP eCLIP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 TSPAN31Q12999 210 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 RAET1LQ5VY80 246 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 KDM4DQ6B0I6 523 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 FBXO46Q6PJ61 603 aaPredicted RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 NLGN4YQ8NFZ3 816 aaPredicted RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 PGAM5Q96HS1 289 aa16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 RANGRFQ9HD47 186 aaPredicted RBP16.04■□□□□ 0.16
SLC1A4-201ENST00000234256 VSTM2BA6NLU5 285 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 RFXAPO00287 272 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 ARPC1BO15143 372 aaKnown RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 APBB3O95704 486 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 ZNF16P17020 682 aaPredicted RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 TMEM64Q6YI46 380 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 OR13C3Q8NGS6 347 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 CHTF18Q8WVB6 975 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 SNAPC3Q92966 411 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 DKKL1Q9UK85 242 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 F3P13726 295 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 PRSS3P35030 304 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 IDUAP35475 653 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 PBX2P40425 430 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 OR1D4P47884 311 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC35A2P78381 396 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 MAT1AQ00266 395 aaKnown RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 AIMP2Q13155 320 aaKnown RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 FAM76BQ5HYJ3 339 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 ELP2Q6IA86 826 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 PCNPQ8WW12 178 aaKnown RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 LAMB2P55268 1798 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 ACOD1A6NK06 481 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 GABRPO00591 440 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC22A10Q63ZE4 541 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 CCDC54Q8NEL0 328 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 FAM46BQ96A09 425 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 TOX2Q96NM4 488 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 CLCC1Q96S66 551 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC39A1Q9NY26 324 aa16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 FBXO9Q9UK97 447 aaPredicted RBP16.03■□□□□ 0.16
SLC1A4-201ENST00000234256 SOCS6O14544 535 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 YY2O15391 372 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 NR2C1P13056 603 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 SYT6Q5T7P8 510 aaPredicted RBP16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 TMEM164Q5U3C3 297 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 TMEM184AQ6ZMB5 413 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 FAM3CQ92520 227 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 TOE1Q96GM8 510 aaKnown RBP16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 SHDQ96IW2 340 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 PELOQ9BRX2 385 aaKnown RBP16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 HSFX1Q9UBD0 423 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 NPIPA2E9PIF3 369 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 NPIPA3F8WFD2 350 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 ELAVL4P26378 380 aaKnown RBP16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 SSTR2P30874 369 aa16.02■□□□□ 0.16
SLC1A4-201ENST00000234256 SLC1A3P43003 542 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms