RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TXLNGYQ9BZA5 131 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 ESRP2Q9H6T0 727 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 CLEC4AQ9UMR7 237 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 GPC6Q9Y625 555 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 ATRQ13535 2644 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 A0A0J9YW62 118 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 TMEM114B3SHH9 223 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 TNFSF11O14788 317 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 PRKD3O94806 890 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 FGF4P08620 206 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 LINGO3P0C6S8 592 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 ATP6V1C1P21283 382 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 MAPK1P28482 360 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 AGTR1P30556 359 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 IDUAP35475 653 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 POU6F2P78424 691 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 DUSP5Q16690 384 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 EXOSC6Q5RKV6 272 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 CXXC5Q7LFL8 322 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 TDRPQ86YL5 185 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 CCDC63Q8NA47 563 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 SPATA3Q8NHX4 192 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 PIGUQ9H490 435 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 USF3Q68DE3 2245 aa15.9■□□□□ 0.14
SHKBP1-227ENST00000602011 HEATR5AQ86XA9 2040 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 A0A1W2PPM1 405 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 SHISA8B8ZZ34 492 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 COPEO14579 308 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 GMFGO60234 142 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 YES1P07947 543 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 ACP2P11117 423 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 NID1P14543 1247 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 SDC1P18827 310 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 RFTN2Q52LD8 501 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 SFRP5Q5T4F7 317 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 FIGNL1Q6PIW4 674 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 SZRD1Q7Z422 152 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 WFDC8Q8IUA0 241 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 GABRG1Q8N1C3 465 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 RNF128Q8TEB7 428 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 AKAP1Q92667 903 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 CIDECQ96AQ7 238 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 TSSK3Q96PN8 268 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 RNF115Q9Y4L5 304 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
SHKBP1-227ENST00000602011 ZNF195O14628 629 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 AKAP10O43572 662 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 TRIM13O60858 407 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 LYPLA1O75608 230 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 CD3EP07766 207 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 IL32P24001 234 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 P2RX1P51575 399 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 ZNF239Q16600 458 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 LSM12Q3MHD2 195 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 KLHL26Q53HC5 615 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 KIF18AQ8NI77 898 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 POC1BQ8TC44 478 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 FBXW5Q969U6 566 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 MOAP1Q96BY2 351 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 SH3YL1Q96HL8 342 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 MRGPRX4Q96LA9 322 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 PRPF18Q99633 342 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 GRIP2Q9C0E4 1043 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 EML4Q9HC35 981 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 ZCCHC3Q9NUD5 404 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 ATAD3AQ9NVI7 634 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 FBXO34Q9NWN3 711 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 KLHL13Q9P2N7 655 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 ATP6V1HQ9UI12 483 aa15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 SONP18583 2426 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-227ENST00000602011 OVOL3O00110 214 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 LSM1O15116 133 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 GCM2O75603 506 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 HPCAL1P37235 193 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 RAC3P60763 192 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 ITGADQ13349 1161 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 ZNF385BQ569K4 471 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 NCMAPQ5T1S8 102 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 CLEC6AQ6EIG7 209 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 HEPHL1Q6MZM0 1159 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 ANKRD26P1Q6NSI1 321 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 CDC73Q6P1J9 531 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 BHLHB9Q6PI77 547 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 GATSQ8NAP1 163 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 OR56A1Q8NGH5 318 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 PSMA8Q8TAA3 256 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 PHOSPHO1Q8TCT1 267 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 ADAMTS15Q8TE58 950 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 OR5P2Q8WZ92 322 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 JADE3Q92613 823 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 S100PBPQ96BU1 408 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 FAM120BQ96EK7 910 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 C16orf58Q96GQ5 468 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 PPP3R2Q96LZ3 170 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 ACTRT3Q9BYD9 372 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 KLHL9Q9P2J3 617 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 FAF1Q9UNN5 650 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 LAMP3Q9UQV4 416 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 STAB1Q9NY15 2570 aa15.87■□□□□ 0.13
SHKBP1-227ENST00000602011 GTPBP1O00178 669 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms