RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CEP70Q8NHQ1 597 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 ACTRT2Q8TDY3 377 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 C11orf24Q96F05 449 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 NSRP1Q9H0G5 558 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 FOLH1BQ9HBA9 442 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 PLSCR4Q9NRQ2 329 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 NOP53Q9NZM5 478 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 PPP4R1LQ9P1A2 415 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF175Q9Y473 711 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 A0A0G2JND7 137 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF195O14628 629 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 HS3ST1O14792 307 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 BCAS2O75934 225 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 IL3P08700 152 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 BCKDHAP12694 445 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 LSP1P33241 339 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 EVI2BP34910 448 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 ASMTP46597 345 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 HMBOX1Q6NT76 420 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF611Q8N823 705 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 OR7G2Q8NG99 324 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 LILRB1Q8NHL6 650 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 DTNBP1Q96EV8 351 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 PLPPR2Q96GM1 343 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 FCRL1Q96LA6 429 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 TSSK3Q96PN8 268 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF317Q96PQ6 595 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 CXorf56Q9H5V9 222 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 MYNNQ9NPC7 610 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 TCF7L2Q9NQB0 619 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 CLEC4AQ9UMR7 237 aa14.74□□□□□ -0.05
SHKBP1-215ENST00000597649 GMNCA6NCL1 334 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 RNF212BA8MTL3 300 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 SHISA8B8ZZ34 492 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 H3BML4 177 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 SDC1P18827 310 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 KRT20P35900 424 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 PSG6Q00889 435 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 FGFBP1Q14512 234 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 CLEC12BQ2HXU8 276 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 PRSS53Q2L4Q9 553 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 OGFOD2Q6N063 350 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 IKBIPQ70UQ0 350 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 CPLX4Q7Z7G2 160 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 FAM9CQ8IZT9 166 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 METTL25Q8N6Q8 603 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 RFWD2Q8NHY2 731 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 DUSP19Q8WTR2 217 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 ERP27Q96DN0 273 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 MAELQ96JY0 434 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 CCDC28BQ9BUN5 200 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 FAM107BQ9H098 131 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 MIEF1Q9NQG6 463 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 BAIAP2L1Q9UHR4 511 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 LAMP3Q9UQV4 416 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 ALPK2Q86TB3 2170 aa14.73□□□□□ -0.05
SHKBP1-215ENST00000597649 OVOL3O00110 214 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 UBDO15205 165 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 AKAP10O43572 662 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 PLOD3O60568 738 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 DDX5P17844 614 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 ARFIP2P53365 341 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 SEC24CP53992 1094 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 DMTNQ08495 405 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 STX5Q13190 355 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 TMEM44Q2T9K0 475 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 LSM12Q3MHD2 195 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 GGNQ86UU5 652 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 WFDC8Q8IUA0 241 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 CLHC1Q8NHS4 586 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 AKAP1Q92667 903 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 GFM2Q969S9 779 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 EXOSC8Q96B26 276 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 C1GALT1C1Q96EU7 318 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 EGLN2Q96KS0 407 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 OR52B2Q96RD2 323 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 EBF4Q9BQW3 602 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 REG4Q9BYZ8 158 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 GIMAP4Q9NUV9 329 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 ASIC5Q9NY37 505 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 CADP27708 2225 aa14.72□□□□□ -0.05
SHKBP1-215ENST00000597649 E9PBE3 544 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 LINC01387J3KSC0 135 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 TMCC2O75069 709 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 G6PDP11413 515 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 PPP3CBP16298 524 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 IL11P20809 199 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 HPCAL1P37235 193 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 RPL3P39023 403 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 GANABQ14697 944 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 CTU2Q2VPK5 515 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 FAM71E1Q6IPT2 247 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 R3HCC1LQ7Z5L2 792 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 MARCH3Q86UD3 253 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 PRPF18Q99633 342 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 TMEM120AQ9BXJ8 343 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 DPY30Q9C005 99 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 KLHL14Q9P2G3 628 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms