RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 KRTAP10-9P60411 292 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 SNTB1Q13884 538 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 GSTA3Q16772 222 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 TNFAIP8L2Q6P589 184 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 GGNQ86UU5 652 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 GRAMD2AQ8IUY3 354 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 GCNT2Q8N0V5 402 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 XAGE5Q8WWM1 108 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 RAB8BQ92930 207 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 RNASE6Q93091 150 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ZBTB8AQ96BR9 441 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ZNF524Q96C55 264 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 SLC35A5Q9BS91 424 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ZNF350Q9GZX5 532 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ICAM5Q9UMF0 924 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 CARD8Q9Y2G2 431 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ANKHD1Q8IWZ3 2542 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 CENPVL1A0A0U1RR11 272 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 PRAMEF27A3QJZ7 478 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 HMGB1P1B2RPK0 211 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 UBDO15205 165 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 SEC14L5O43304 696 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 DIAPH2O60879 1101 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 SASH3O75995 380 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 CHI3L1P36222 383 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF41P51814 821 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 EEFSECP57772 596 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 TLE4Q04727 773 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 FUT5Q11128 374 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 GPR68Q15743 365 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF141Q15928 474 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 NDUFAF6Q330K2 333 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 PDZK1Q5T2W1 519 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 CHMP1BQ7LBR1 199 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 METTL25Q8N6Q8 603 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 LRRC8CQ8TDW0 803 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 SMPDL3BQ92485 455 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 FIG4Q92562 907 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF845Q96IR2 970 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 LURAP1Q96LR2 239 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 RNF145Q96MT1 663 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 PANX1Q96RD7 426 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 ZBTB18Q99592 522 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 SFXN3Q9BWM7 321 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 PINK1Q9BXM7 581 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 MCCC2Q9HCC0 563 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC6A13Q9NSD5 602 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 EXD2Q9NVH0 621 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 ZIM2Q9NZV7 527 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 KCNN3Q9UGI6 736 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 MKLN1Q9UL63 735 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 MPDZO75970 2070 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 AKAP9Q99996 3911 aa16.64■□□□□ 0.25
SHKBP1-202ENST00000593764 HEATR5AQ86XA9 2040 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 SLC22A20A6NK97 555 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 H3BNH8 94 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 EFNA2O43921 213 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 UGT2B17O75795 530 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 TNFSF13O75888 250 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 TGDSO95455 350 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 AGR2O95994 175 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 IL6P05231 212 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 GSNP06396 782 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 GUSBP08236 651 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 UQCRC1P31930 480 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 P2RX1P51575 399 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 RAC1P63000 192 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 TOMM34Q15785 309 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 CTU2Q2VPK5 515 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF621Q6ZSS3 439 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 C16orf62Q7Z3J2 963 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 RNF130Q86XS8 419 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 OR9I1Q8NGQ6 314 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 GPR119Q8TDV5 335 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 ADGRG7Q96K78 797 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 SAP130Q9H0E3 1048 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 MYO9AB2RTY4 2548 aa16.63■□□□□ 0.25
SHKBP1-202ENST00000593764 SPG11Q96JI7 2443 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 A0A1W2PNV4 684 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 SERINC4A6NH21 518 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 EEF1E1-BLOC1S5C9J1V9 151 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 GTPBP1O00178 669 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 HMGN4O00479 90 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 EEF1E1O43324 174 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 OPN1LWP04000 364 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 IL11P20809 199 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 IDH3AP50213 366 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 SUMO3P55854 103 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 PPP2R2AP63151 447 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 LRRC74AQ0VAA2 488 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 MAPK14Q16539 360 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ATAD3BQ5T9A4 648 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 TYW3Q6IPR3 259 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 TRIML2Q8N7C3 387 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ZNF614Q8N883 585 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 FNDC9Q8TBE3 224 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ROPN1LQ96C74 230 aa16.62■□□□□ 0.25
SHKBP1-202ENST00000593764 ZG16BQ96DA0 208 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms