RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NEUROD4Q9HD90 331 aa14.24□□□□□ -0.13
CRLF3-203ENST00000578692 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
CRLF3-203ENST00000578692 NOP53Q9NZM5 478 aaKnown RBP14.24□□□□□ -0.13
CRLF3-203ENST00000578692 C6orf203Q9P0P8 240 aaPredicted RBP14.24□□□□□ -0.13
CRLF3-203ENST00000578692 MCTS1Q9ULC4 181 aaKnown RBP14.24□□□□□ -0.13
CRLF3-203ENST00000578692 EMC9Q9Y3B6 208 aa14.24□□□□□ -0.13
CRLF3-203ENST00000578692 NUP214P35658 2090 aaPredicted RBP14.24□□□□□ -0.13
CRLF3-203ENST00000578692 UQCRHLA0A096LP55 91 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 NPIPA5A0A0B4J1W7 369 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 A0A0J9YW62 118 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 NPIPA7E9PJI5 369 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 H3BNH8 94 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 BIRC5O15392 142 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 SYNGR4O95473 234 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 PLGP00747 810 aaPredicted RBP14.23□□□□□ -0.13
CRLF3-203ENST00000578692 LINGO3P0C6S8 592 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 NPIPA8P0DM63 369 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 IL11P20809 199 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 EIF1P41567 113 aaKnown RBP14.23□□□□□ -0.13
CRLF3-203ENST00000578692 P2RX1P51575 399 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ATP12AP54707 1039 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 C21orf58P58505 322 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ABCE1P61221 599 aaKnown RBP14.23□□□□□ -0.13
CRLF3-203ENST00000578692 HBA1P69905 142 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ADAM8P78325 824 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ZNF117Q03924 483 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ZNF844Q08AG5 666 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 CHI3L2Q15782 390 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 HBMQ6B0K9 141 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 LILRA2Q8N149 483 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ZNF781Q8N8C0 355 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 OR5AK3PQ8NH89 298 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 OR2V1Q8NHB1 315 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 GMPPAQ96IJ6 420 aaPredicted RBP14.23□□□□□ -0.13
CRLF3-203ENST00000578692 PPP1R36Q96LQ0 422 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 ASIC5Q9NY37 505 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 CLEC4AQ9UMR7 237 aa14.23□□□□□ -0.13
CRLF3-203ENST00000578692 GTPBP1O00178 669 aaKnown RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 TNFSF11O14788 317 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 NUDT14O95848 222 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SERPINE1P05121 402 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CD53P19397 219 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CTBP2P56545 445 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CARD18P57730 90 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 PDCD2Q16342 344 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 GTF2IRD2BQ6EKJ0 949 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 BHLHB9Q6PI77 547 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CBLN3Q6UW01 205 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ZNF550Q7Z398 422 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 GTF2IRD2Q86UP8 949 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 OR6K3Q8NGY3 331 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 OSTF1Q92882 214 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 OR7D2Q96RA2 312 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 KLHL4Q9C0H6 718 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 C20orf27Q9GZN8 174 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 AKTIPQ9H8T0 292 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SSU72Q9NP77 194 aaKnown RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 GLRX2Q9NS18 164 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ICAM5Q9UMF0 924 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CARD8Q9Y2G2 431 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 RAP2CQ9Y3L5 183 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 DTNAQ9Y4J8 743 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 HRNRQ86YZ3 2850 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 DUXAA6NLW8 204 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 DEFB108AA8MXU0 73 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 TM9SF1O15321 606 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SIAH2O43255 324 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 EFNA2O43921 213 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SS18L1O75177 396 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 MYZAPP0CAP1 466 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 MATN1P21941 496 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 CRYGSP22914 178 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ADH6P28332 368 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SOAT1P35610 550 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SLC1A6P48664 564 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 RNF144AP50876 292 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 FOXD4Q12950 439 aaPredicted RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 EXOC3L2Q2M3D2 409 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ANKRD34AQ69YU3 496 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 OR4F3Q6IEY1 312 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 C6orf120Q7Z4R8 191 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 OR5D16Q8NGK9 328 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 PIK3IP1Q96FE7 263 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ZC3HAV1LQ96H79 300 aaKnown RBP14.22□□□□□ -0.13
CRLF3-203ENST00000578692 KLHL15Q96M94 604 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 SDF2Q99470 211 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 PCDHGB4Q9UN71 923 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ACTL7BQ9Y614 415 aa14.22□□□□□ -0.13
CRLF3-203ENST00000578692 ABCA4P78363 2273 aa14.21□□□□□ -0.13
CRLF3-203ENST00000578692 NPIPB9F8W1W9 429 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 ZNF195O14628 629 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 OIP5O43482 229 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 SNUPNO95149 360 aaKnown RBP14.21□□□□□ -0.14
CRLF3-203ENST00000578692 DHRS4L1P0CG22 281 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 CCKARP32238 428 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 SFTPDP35247 375 aa14.21□□□□□ -0.14
CRLF3-203ENST00000578692 RPL14P50914 215 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms