RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 TAAR9Q96RI9 348 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 BIN3Q9NQY0 253 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 GABRR3A8MPY1 467 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 COCHO43405 550 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 MED6O75586 246 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF14P17017 642 aaPredicted RBP7.36□□□□□ -1.23
VPS13D-211ENST00000543710 ADRA1AP35348 466 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 GJA5P36382 358 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 RNF144AP50876 292 aaPredicted RBP7.36□□□□□ -1.23
VPS13D-211ENST00000543710 EMP2P54851 167 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SPIN3Q5JUX0 258 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 TIGD3Q6B0B8 471 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 MEPCEQ7L2J0 689 aaKnown RBP7.36□□□□□ -1.23
VPS13D-211ENST00000543710 PPP1R35Q8TAP8 253 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 IFI44Q8TCB0 444 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 PHOSPHO1Q8TCT1 267 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 FUBP1Q96AE4 644 aaKnown RBP7.36□□□□□ -1.23
VPS13D-211ENST00000543710 BORCS8Q96FH0 119 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 GSTO2Q9H4Y5 243 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 CCSER2Q9H7U1 834 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SACM1LQ9NTJ5 587 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SMOXQ9NWM0 555 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 FBXL3Q9UKT7 428 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 LOXL2Q9Y4K0 774 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 TRIM64CA6NLI5 447 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 TTC34A8MYJ7 566 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SYT5O00445 386 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 DVL2O14641 736 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 GPR39O43194 453 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 TSPAN12O95859 305 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 BPNT1O95861 308 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SCGB1D2O95969 90 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF806P0C7X5 589 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 CDKN2DP55273 166 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 GPR50Q13585 617 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 RNF165Q6ZSG1 346 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 PGAM5Q96HS1 289 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 PRKAB1Q9Y478 270 aa7.36□□□□□ -1.23
VPS13D-211ENST00000543710 SLX4Q8IY92 1834 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZSCAN5BA6NJL1 495 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 KRBOX1C9JBD0 128 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 RGS11O94810 467 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ETV4P43268 484 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC6A9P48067 706 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SPINT3P49223 89 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 RAP2BP61225 183 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 HMGCS1Q01581 520 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 MFGE8Q08431 387 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 APOFQ13790 326 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 PPA1Q15181 289 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CCNJQ5T5M9 372 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 IGDCC3Q8IVU1 814 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR5L1Q8NGL2 311 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TRMT10AQ8TBZ6 339 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 IGSF8Q969P0 613 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SARAFQ96BY9 339 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 RPL10LQ96L21 214 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC46A1Q96NT5 459 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 UBL7Q96S82 380 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 LRIT1Q9P2V4 623 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TRBV2A0A0J9YWF9 115 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ANKRD33BA6NCL7 494 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TMEM200CA6NKL6 621 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CSTAP01040 98 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 HBE1P02100 147 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF8P17098 575 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 RPL23AP62750 156 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 PDE7AQ13946 482 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ATAD3CQ5T2N8 411 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 AGAP7PQ5VUJ5 663 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CYP4V2Q6ZWL3 525 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 HTR3DQ70Z44 454 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR6N2Q8NGY6 317 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 C22orf15Q8WYQ4 148 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 MAFIPQ8WZ33 124 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC25A36Q96CQ1 311 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZBED3Q96IU2 234 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TSNAXQ99598 290 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 NUDT9Q9BW91 350 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 LHPPQ9H008 270 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 NIPAL2Q9H841 368 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 DNAJC27Q9NZQ0 273 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 B4GALT6Q9UBX8 382 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 FUOMA2VDF0 154 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 GOSR2O14653 212 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR2T1O43869 369 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC43A1O75387 559 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SNAP29O95721 258 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 BPIP17213 487 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 IVDP26440 423 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TGM4P49221 684 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SNRPGP62308 76 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ILKQ13418 452 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 RSU1Q15404 277 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR4D1Q15615 310 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms