RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SIGLEC1Q9BZZ2 1709 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 A0A0U1RRA0 63 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 SAGE2PA6NJ88 616 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ANKRD63C9JTQ0 380 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 POLR3GO15318 223 aaPredicted RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 GUCA1CO95843 209 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 JCHAINP01591 159 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 CD55P08174 381 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 CCDC172P0C7W6 258 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF18P17022 549 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 CD1BP29016 333 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 RPS10P46783 165 aaKnown RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 PLOD1Q02809 727 aaPredicted RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 CCDC173Q0VFZ6 552 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ZP4Q12836 540 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ACSF3Q4G176 576 aaPredicted RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 PPP1R27Q86WC6 154 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF100Q8IYN0 542 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 TMCO5AQ8N6Q1 288 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 C7orf33Q8WU49 177 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 PHYHIPQ92561 330 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 ART4Q93070 314 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 SNX21Q969T3 373 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 VPS39Q96JC1 886 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 SMIM14Q96QK8 99 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 RTBDNQ9BSG5 229 aaPredicted RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 RWDD1Q9H446 243 aaPredicted RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 NCOR1P1Q9H4R4 102 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 VPS37BQ9H9H4 285 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 SPRR3Q9UBC9 169 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 SH3BGRL2Q9UJC5 107 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 WSB1Q9Y6I7 421 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 BCL9LQ86UU0 1499 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 PDE4DIPQ5VU43 2346 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 RNF17Q9BXT8 1623 aaKnown RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 CDK13Q14004 1512 aaKnown RBP2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 RTEL1-TNFRSF6BF6WH68 1400 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 GRIN2DO15399 1336 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 KIF16BQ96L93 1317 aa2.68□□□□□ -1.98
UBE2D3-225ENST00000508476 NWD1Q149M9 1564 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 TMEM94Q12767 1356 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 M0QX08 132 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 TM9SF1O15321 606 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 FMO6PO60774 539 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 RAMP1O60894 148 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 NOL3O60936 208 aaKnown RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 BBOX1O75936 387 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 SFTPCP11686 197 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 HOXD10P28358 340 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ADORA2BP29275 332 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 SRYQ05066 204 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 UBE2V2Q15819 145 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 PKN2Q16513 984 aaKnown RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 LRRC36Q1X8D7 754 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 CCDC152Q4G0S7 254 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 AGKQ53H12 422 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 EOGTQ5NDL2 527 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 AP1ARQ63HQ0 302 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 PLBD1Q6P4A8 553 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 LEG1Q6P5S2 330 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 CCDC170Q8IYT3 715 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 OR52K2Q8NGK3 314 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 OR2A12Q8NGT7 310 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ANKRD49Q8WVL7 239 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF75CPQ92670 426 aaPredicted RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 MCHR2Q969V1 340 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 TADA1Q96BN2 335 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 FGGYQ96C11 551 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 C16orf45Q96MC5 204 aaPredicted RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF396Q96N95 335 aaPredicted RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 CTRCQ99895 268 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 LZTS2Q9BRK4 669 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 NDUFAF3Q9BU61 184 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 NANSQ9NR45 359 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 OR1A1Q9P1Q5 309 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF223Q9UK11 482 aaPredicted RBP2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 RICTORQ6R327 1708 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ZMYM4Q5VZL5 1548 aa2.67□□□□□ -1.98
UBE2D3-225ENST00000508476 ABCA8O94911 1581 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 A2ML1A8K2U0 1454 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 ATP10BO94823 1461 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 SCAF11Q99590 1463 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 MSH6P52701 1360 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 SUPT6HQ7KZ85 1726 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 A0A0J9YXY3 114 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 PPIHO43447 177 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 SNAI2O43623 268 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 ZBTB14O43829 449 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 PALMO75781 387 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 CABYRO75952 493 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 YEATS4O95619 227 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 STAMBPO95630 424 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 MT-ND3P03897 115 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 ZCCHC18P0CG32 403 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 HSPA5P11021 654 aaKnown RBP2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 ZNF44P15621 663 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 IGLL1P15814 213 aa2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 ARF4P18085 180 aaPredicted RBP2.66□□□□□ -1.98
UBE2D3-225ENST00000508476 HLA-DPA1P20036 260 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms