RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HAND2P61296 217 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RPS8P62241 208 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RPS27AP62979 156 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 NTHL1P78549 312 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RIPPLY1Q0D2K3 151 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 COX10Q12887 443 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SRSF5Q13243 272 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PLD1Q13393 1074 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SIX1Q15475 284 aaPredicted RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SLC15A2Q16348 729 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 MAPK6Q16659 721 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PCK2Q16822 640 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SFT2D3Q587I9 215 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF506Q5JVG8 444 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 C10orf120Q5SQS8 335 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 LINC00242Q5T6M2 205 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PRAMEF5Q5TYX0 476 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 MARC1Q5VT66 337 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PRAMEF6Q5VXH4 476 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PRR5LQ6MZQ0 368 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ZSCAN25Q6NSZ9 544 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ARMCX5Q6P1M9 558 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 VITQ6UXI7 678 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 NUFIP2Q7Z417 695 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 HSD11B1LQ7Z5J1 315 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TSEN54Q7Z6J9 526 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 MOB3BQ86TA1 216 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PAQR7Q86WK9 346 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 EGFL6Q8IUX8 553 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TTC5Q8N0Z6 440 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 UBE2J2Q8N2K1 259 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 DHRSXQ8N5I4 330 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF781Q8N8C0 355 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 C15orf54Q8N8G6 183 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 OR4F17Q8NGA8 305 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 OR10A7Q8NGE5 316 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 OR9K2Q8NGE7 335 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 OR4D5Q8NGN0 318 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ZPLD1Q8TCW7 415 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SSC4DQ8WTU2 575 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RPL3LQ92901 407 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ART4Q93070 314 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 NABP1Q96AH0 204 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 C1orf147Q96MC9 270 aaPredicted RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RPRD1AQ96P16 312 aaPredicted RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RCHY1Q96PM5 261 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 OR4F4Q96R69 305 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 FAM173AQ9BQD7 235 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 APOL2Q9BQE5 337 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TTYH2Q9BSA4 534 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 DUSP16Q9BY84 665 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TRIM9Q9C026 710 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 EXO5Q9H790 373 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 NT5DC2Q9H857 520 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 GNB4Q9HAV0 340 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 MCCC2Q9HCC0 563 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 GLRX2Q9NS18 164 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ABCC13Q9NSE7 274 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ETNK2Q9NVF9 386 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF581Q9P0T4 197 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SEC14L3Q9UDX4 400 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 CA5BQ9Y2D0 317 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 A0A075B6Q4 140 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 ARHGEF35A5YM69 484 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 LRRIQ4A6NIV6 560 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 FOXI3A8MTJ6 420 aaPredicted RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 KLLNB2CW77 178 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 SHISA9B4DS77 424 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 K7EQG2 157 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 CASC3O15234 703 aaKnown RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 NBR2O15453 112 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 MSH4O15457 936 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 TAPBPO15533 448 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 LRRTM2O43300 516 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 PPIHO43447 177 aaKnown RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 PRKAB2O43741 272 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 TYROBPO43914 113 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 TIMM8AO60220 97 aaPredicted RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 N4BP1O75113 896 aaKnown RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 TRIM3O75382 744 aaPredicted RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 SRSF10O75494 262 aaKnown RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 NUDT14O95848 222 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 PGK1P00558 417 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 JCHAINP01591 159 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 IGHG4P01861 327 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 KRT14P02533 472 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 FGF4P08620 206 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 FCGR3AP08637 254 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 OR9G9P0C7N8 305 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 HSMCR30P0CW71 290 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 GZMAP12544 262 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 GATA2P23769 480 aaPredicted RBP1.87□□□□□ -2.11
LMNB1-207ENST00000494185 ID1P41134 155 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 MAGEA5P43359 124 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 SLC7A2P52569 658 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 EFNB2P52799 333 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 SEC61GP60059 68 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
LMNB1-207ENST00000494185 EWSR1Q01844 656 aaKnown RBP eCLIP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms