RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 ANXA6P08133 673 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 RAP2AP10114 183 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 LIMK1P53667 647 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 VSX2P58304 361 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SLC5A12Q1EHB4 618 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 ERICH5Q6P6B1 374 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 TRIM40Q6P9F5 258 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 TMPRSS11AQ6ZMR5 421 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 PROSER1Q86XN7 944 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 RNF130Q86XS8 419 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 GHDCQ8N2G8 530 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 OR2L5Q8NG80 312 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SLC22A18Q96BI1 424 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 BHLHE41Q9C0J9 482 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 BABAM2Q9NXR7 383 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 TP53BP1Q12888 1972 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 A0A1B0GTQ1 180 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 H0YGG7 62 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 RNASET2O00584 256 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 GPR37L1O60883 481 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 UBXN7O94888 489 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 KCNK5O95279 499 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 HK1P19367 917 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 GRK5P34947 590 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 CHI3L1P36222 383 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 FEN1P39748 380 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 MANFP55145 182 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 C21orf58P58505 322 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 ARF3P61204 181 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SWI5Q1ZZU3 235 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 ANXA8L1Q5VT79 327 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 CALHM3Q86XJ0 350 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 PTOV1Q86YD1 416 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 OR4N5Q8IXE1 308 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SVOPLQ8N434 492 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 OR5T3Q8NGG3 340 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 OR2I1PQ8NGU4 316 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SLC38A3Q99624 504 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 DDX31Q9H8H2 851 aaKnown RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 SMURF1Q9HCE7 757 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 ZNF275Q9NSD4 429 aaPredicted RBP16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 MAGEL2Q9UJ55 1249 aa16.96■□□□□ 0.31
POLR2J3-205ENST00000489144 RP1P56715 2156 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC9B1P1A6NJY1 282 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 DBX1A6NMT0 343 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 PROM1O43490 865 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 CREG1O75629 220 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 ZNF682O95780 498 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 AIFM1O95831 613 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 ID2Q02363 134 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 CSTF1Q05048 431 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 LPAL2Q16609 132 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SOWAHCQ53LP3 525 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 ZC3H12BQ5HYM0 836 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC6A19Q695T7 634 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 ARMC6Q6NXE6 501 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 KLHL17Q6TDP4 642 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 CAMKMTQ7Z624 323 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 OOSP2Q86WS3 158 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC44A2Q8IWA5 706 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 CYP4Z2PQ8N1L4 340 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 IPCEF1Q8WWN9 437 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 KCNC2Q96PR1 638 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 MAP3K3Q99759 626 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 RHNO1Q9BSD3 238 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 KCMF1Q9P0J7 381 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 UNC13CQ8NB66 2214 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 CACNA1EQ15878 2313 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 OPN1SWP03999 348 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 AHRP35869 848 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 AFF3P51826 1226 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC9A5Q14940 896 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 HEPACAMQ14CZ8 416 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 LAIR1Q6GTX8 287 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 SLC27A4Q6P1M0 643 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 OLIG3Q7RTU3 272 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 GKN2Q86XP6 184 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 TCEAL3Q969E4 200 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 TBC1D20Q96BZ9 403 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 TMEM68Q96MH6 324 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 QRFPRQ96P65 431 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 TGM7Q96PF1 710 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 BTNL2Q9UIR0 455 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 MAB21L2Q9Y586 359 aa16.95■□□□□ 0.3
POLR2J3-205ENST00000489144 WRBO00258 174 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 FAM20BO75063 409 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 IFNA4P05014 189 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 RPS15AP62244 130 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 TIGD6Q17RP2 521 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 RFX4Q33E94 735 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 AMZ1Q400G9 498 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 ANKRD34AQ69YU3 496 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 TNFAIP8L2Q6P589 184 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 RTL4Q6ZR62 310 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 LSRQ86X29 649 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 SIGLEC11Q96RL6 698 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 OR51E2Q9H255 320 aa16.94■□□□□ 0.3
POLR2J3-205ENST00000489144 NDRG3Q9UGV2 375 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms