RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, human

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-208	ENST00000467996	ANGPTL4	Q9BY76	406 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	EVA1A	Q9H8M9	152 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	PROK2	Q9HC23	129 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	SACM1L	Q9NTJ5	587 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	CNIH4	Q9P003	139 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	SLC9A8	Q9Y2E8	581 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	HRH3	Q9Y5N1	445 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	NCKAP5	O14513	1909 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	URB1	O60287	2271 aa	Known RBP	10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	NCOR2	Q9Y618	2525 aa		10.83	□□□□□ -0.68
RNF13-208	ENST00000467996	PCNX3	Q9H6A9	2034 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		A0A0G2JMM0	328 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		A0A1W2PPB8	328 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		A0A1W2PRS3	328 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ANKRD33B	A6NCL7	494 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	KIR3DP1	A8MWS1	328 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		G3V3Y1	287 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		H3BNX3	289 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	GTPBP1	O00178	669 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	EIF4E2	O60573	245 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ADAM11	O75078	769 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	SLC25A12	O75746	678 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	CYP7B1	O75881	506 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		P04436	131 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	IFNW1	P05000	195 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	GKN3P	P0CG01	181 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ENDOU	P21128	410 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	MAGEA2	P43356	314 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ZNF136	P52737	540 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ZFP1	Q6P2D0	407 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	AAGAB	Q6PD74	315 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	CBLN3	Q6UW01	205 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	DEF8	Q6ZN54	512 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	TSEN54	Q7Z6J9	526 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	RBM45	Q8IUH3	476 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	C10orf67	Q8IYJ2	551 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	TMCO5A	Q8N6Q1	288 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	HAS2	Q92819	552 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	SLC35B4	Q969S0	331 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ARSG	Q96EG1	525 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	AMBRA1	Q9C0C7	1298 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	LAT2	Q9GZY6	243 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	S100A14	Q9HCY8	104 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	IL1RAP	Q9NPH3	570 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	TIMMDC1	Q9NPL8	285 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	EXOSC3	Q9NQT5	275 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	ARMC1	Q9NVT9	282 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	PPP4R1L	Q9P1A2	415 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	TES	Q9UGI8	421 aa	Known RBP	10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	CARD8	Q9Y2G2	431 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	AP4S1	Q9Y587	144 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996	CSAG2	Q9Y5P2	127 aa		10.82	□□□□□ -0.68
RNF13-208	ENST00000467996		B4DXG7	233 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	AP3D1	O14617	1153 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	HCRTR2	O43614	444 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	GMFG	O60234	142 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	TPST2	O60704	377 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	TIPRL	O75663	272 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ITGB2	P05107	769 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	PRG2	P13727	222 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	HOXB6	P17509	224 aa	Known RBP	10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ACAA2	P42765	397 aa	Known RBP	10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	DNASE1L1	P49184	302 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	CCR4	P51679	360 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	HOXC5	Q00444	222 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	C17orf67	Q0P5P2	114 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	EPS8	Q12929	822 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	COL28A1	Q2UY09	1125 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	IQCC	Q4KMZ1	466 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ZNF550	Q7Z398	422 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ZNF440	Q8IYI8	595 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	B4GALNT2	Q8NHY0	566 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	DUSP19	Q8WTR2	217 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	PHF10	Q8WUB8	498 aa	Known RBP	10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	EXTL1	Q92935	676 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	CRELD1	Q96HD1	420 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	TMEM41A	Q96HV5	264 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	FRMD6	Q96NE9	622 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	KLHDC3	Q9BQ90	382 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	CHID1	Q9BWS9	393 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	HES7	Q9BYE0	225 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	SDHAF3	Q9NRP4	125 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	DEPP	Q9NTK1	212 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	NDUFAF4	Q9P032	175 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ZMIZ1	Q9ULJ6	1067 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ICAM5	Q9UMF0	924 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	ENPP4	Q9Y6X5	453 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	CFAP47	Q6ZTR5	3102 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	DMXL2	Q8TDJ6	3036 aa		10.81	□□□□□ -0.68
RNF13-208	ENST00000467996	IGLV3-32	A0A0A0MS00	114 aa		10.8	□□□□□ -0.68
RNF13-208	ENST00000467996	CPSF4L	A6NMK7	179 aa	Known RBP	10.8	□□□□□ -0.68
RNF13-208	ENST00000467996		H0Y3Z8	333 aa		10.8	□□□□□ -0.68
RNF13-208	ENST00000467996	MKRN2OS	H3BPM6	223 aa		10.8	□□□□□ -0.68
RNF13-208	ENST00000467996		J3KTA2	159 aa		10.8	□□□□□ -0.68
RNF13-208	ENST00000467996	SNPH	O15079	494 aa		10.8	□□□□□ -0.68
RNF13-208	ENST00000467996	HNRNPR	O43390	633 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms