RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SMAD5Q99717 465 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 ARHGDIGQ99819 225 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 UGT2B28Q9BY64 529 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 LAT2Q9GZY6 243 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 MAGIXQ9H6Y5 334 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 DEPPQ9NTK1 212 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ACER3Q9NUN7 267 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ANKRD10Q9NXR5 420 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 CNIH4Q9P003 139 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 NDUFAF4Q9P032 175 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 NKX1-2Q9UD57 310 aaPredicted RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 SEC14L3Q9UDX4 400 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ANAPC2Q9UJX6 822 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 RPS6KA6Q9UK32 745 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 PRDM4Q9UKN5 801 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 BAG5Q9UL15 447 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 ICAM5Q9UMF0 924 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SAMD4AQ9UPU9 718 aaKnown RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 ZNF443Q9Y2A4 671 aaPredicted RBP5.44□□□□□ -1.54
USP39-213ENST00000467885 HRH3Q9Y5N1 445 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 SPTBN2O15020 2390 aa5.44□□□□□ -1.54
USP39-213ENST00000467885 IGLV3-32A0A0A0MS00 114 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 DHRS12A0PJE2 317 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 J3KTA2 159 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 GTPBP1O00178 669 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 TP53I11O14683 189 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ZNF264O43296 627 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 HNRNPRO43390 633 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 NDUFB5O43674 189 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 EFNA2O43921 213 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ZIC3O60481 467 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 EIF4E2O60573 245 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 DPM1O60762 260 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 FKBP6O75344 327 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 TRIM3O75382 744 aaPredicted RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 KRT36O76013 467 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ANGPTL1O95841 491 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 F10P00742 488 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 SP1P08047 785 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 GKN3PP0CG01 181 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 RAP2AP10114 183 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CCL3P10147 92 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 IL12BP29460 328 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 GCKP35557 465 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 KRT20P35900 424 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 MAGEA2P43356 314 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CYB561P49447 251 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 HOXC5Q00444 222 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CHRNB3Q05901 458 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 FOXO1Q12778 655 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 PIN1Q13526 163 aaPredicted RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 RAPSNQ13702 412 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ZSWIM7Q19AV6 140 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 NDUFAF6Q330K2 333 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 LINC00303Q3SY05 128 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 FAM98BQ52LJ0 330 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 LRRC23Q53EV4 343 aaPredicted RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 IFI44LQ53G44 452 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 MRPL2Q5T653 305 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 XP32Q5T750 250 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 OR5M10Q6IEU7 315 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 SLC25A25Q6KCM7 469 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 HMBOX1Q6NT76 420 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 SLC30A6Q6NXT4 461 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 RTL4Q6ZR62 310 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CARM1Q86X55 608 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 GPALPP1Q8IXQ4 340 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CMIPQ8IY22 773 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 DND1Q8IYX4 353 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 LSMEM1Q8N8F7 131 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 MDS2Q8NDY4 140 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 GPR119Q8TDV5 335 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 RASSF5Q8WWW0 418 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ASB15Q8WXK1 588 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 LRTOMTQ8WZ04 291 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 LZICQ8WZA0 190 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 SLC35B4Q969S0 331 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ARSGQ96EG1 525 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 HSH2DQ96JZ2 352 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ZNF300Q96RE9 604 aaPredicted RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 PKP2Q99959 881 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 UTP23Q9BRU9 249 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 FUZQ9BT04 418 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 TRIM15Q9C019 465 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ADAM19Q9H013 955 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 RNF32Q9H0A6 362 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 DNAJB12Q9NXW2 375 aaKnown RBP5.43□□□□□ -1.54
USP39-213ENST00000467885 LRFN1Q9P244 771 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 TEKT2Q9UIF3 430 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ACAD8Q9UKU7 415 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 A4GNTQ9UNA3 340 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 AURKCQ9UQB9 309 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 CARD8Q9Y2G2 431 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 NTNG1Q9Y2I2 539 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 ENPP4Q9Y6X5 453 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 FRYQ5TBA9 3013 aa5.43□□□□□ -1.54
USP39-213ENST00000467885 PINLYPA6NC86 204 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 OR5H15A6NDH6 313 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 M0R3H8 397 aa5.42□□□□□ -1.54
USP39-213ENST00000467885 SCDO00767 359 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms