RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SLC34A1Q06495 639 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 EMC4Q5J8M3 183 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 TBCELQ5QJ74 424 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 EXOSC6Q5RKV6 272 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 CBLL1Q75N03 491 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 EIF3MQ7L2H7 374 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 APCDD1LQ8NCL9 501 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 PAPD5Q8NDF8 572 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 B3GNT7Q8NFL0 401 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 FBXO30Q8TB52 745 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 SLC38A5Q8WUX1 472 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 SLC9A6Q92581 669 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 TRNT1Q96Q11 434 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 YIPF4Q9BSR8 244 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 LMF2Q9BU23 707 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 CACYBPQ9HB71 228 aaKnown RBP14.2□□□□□ -0.14
SF3A3-203ENST00000461869 SLC24A3Q9HC58 644 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 TIMMDC1Q9NPL8 285 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 COPS7AQ9UBW8 275 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 ERVK-19Q9WJR5 959 aa14.2□□□□□ -0.14
SF3A3-203ENST00000461869 HCFC1P51610 2035 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 A0A0G2JPF8 293 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 HNRNPCL2B2RXH8 293 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 HNRNPCL3B7ZW38 293 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 H3BNX3 289 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 SERPINB7O75635 380 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 PGM3O95394 542 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 ZNF682O95780 498 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 BAG2O95816 211 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 HNRNPCL4P0DMR1 293 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 ETS2P15036 469 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 S1PR1P21453 382 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 SOX18P35713 384 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 NR0B1P51843 470 aaKnown RBP14.19□□□□□ -0.14
SF3A3-203ENST00000461869 PPIAP62937 165 aaKnown RBP14.19□□□□□ -0.14
SF3A3-203ENST00000461869 GXYLT1Q4G148 440 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 GPAT3Q53EU6 434 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 HEPHL1Q6MZM0 1159 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 DGAT2L6Q6ZPD8 337 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 LRRC74BQ6ZQY2 392 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 SLC44A2Q8IWA5 706 aaPredicted RBP14.19□□□□□ -0.14
SF3A3-203ENST00000461869 PQLC1Q8N2U9 271 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 COX18Q8N8Q8 333 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 MORN4Q8NDC4 146 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 OR5M3Q8NGP4 307 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 PTPMT1Q8WUK0 201 aaPredicted RBP14.19□□□□□ -0.14
SF3A3-203ENST00000461869 HOXB13Q92826 284 aaPredicted RBP14.19□□□□□ -0.14
SF3A3-203ENST00000461869 SLC47A1Q96FL8 570 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 PYURFQ96I23 114 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 ANKRA2Q9H9E1 313 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 FOLH1BQ9HBA9 442 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 BCL2L10Q9HD36 194 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 POLE3Q9NRF9 147 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 TACC2O95359 2948 aa14.19□□□□□ -0.14
SF3A3-203ENST00000461869 FAM221AA4D161 298 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 OR6C76A6NM76 312 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 NPIPA2E9PIF3 369 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 NPIPA3F8WFD2 350 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 PRKD3O94806 890 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 NKX2-2O95096 273 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 ACP2P11117 423 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 HOXB4P17483 251 aaPredicted RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 AQP1P29972 269 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SSTR4P31391 388 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SSR4P51571 173 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 PSPHP78330 225 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 PLGLB1Q02325 96 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 DUSP5Q16690 384 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 ARHGAP11BQ3KRB8 267 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 CYBRD1Q53TN4 286 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 RNF111Q6ZNA4 994 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 TGIF2LYQ8IUE0 185 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SLC16A11Q8NCK7 471 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 CHDHQ8NE62 594 aaPredicted RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 OR5M9Q8NGP3 310 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 OR10Q1Q8NGQ4 319 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SLC2A12Q8TD20 617 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 PMM1Q92871 262 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SENP5Q96HI0 755 aaPredicted RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 VSTM2LQ96N03 204 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SEPHS2Q99611 448 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 FOXC2Q99958 501 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 OR10A5Q9H207 317 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 VCX3BQ9H321 246 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 Q9N2J8 555 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 PNPLA3Q9NST1 481 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 DEPPQ9NTK1 212 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 DNAJB12Q9NXW2 375 aaKnown RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 BAG5Q9UL15 447 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 YARS2Q9Y2Z4 477 aaKnown RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 V9GYQ6 96 aa14.18□□□□□ -0.14
SF3A3-203ENST00000461869 SETD2Q9BYW2 2564 aaPredicted RBP14.18□□□□□ -0.14
SF3A3-203ENST00000461869 FAM166BA8MTA8 275 aa14.17□□□□□ -0.14
SF3A3-203ENST00000461869 A8MVJ9 347 aa14.17□□□□□ -0.14
SF3A3-203ENST00000461869 ACOT7O00154 380 aa14.17□□□□□ -0.14
SF3A3-203ENST00000461869 GUSBP08236 651 aa14.17□□□□□ -0.14
SF3A3-203ENST00000461869 FASP25445 335 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms