RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ACTL7BQ9Y614 415 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ESPNB1AK53 854 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TNFSF11O14788 317 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 DNAJA2O60884 412 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GCM2O75603 506 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CHEK2O96017 543 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OPN1LWP04000 364 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PAX1P15863 534 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CREB1P16220 341 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PSMB1P20618 241 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ELK4P28324 431 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 AGTR1P30556 359 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ETV4P43268 484 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF239Q16600 458 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ANKRD34AQ69YU3 496 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SEZ6L2Q6UXD5 910 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 DDIASQ8IXT1 998 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KRTCAP2Q8N6L1 136 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 B4GALNT2Q8NHY0 566 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SH3YL1Q96HL8 342 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PPP3R2Q96LZ3 170 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GSX2Q9BZM3 304 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SERHL2Q9H4I8 314 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 COQ10BQ9H8M1 238 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 STOML1Q9UBI4 398 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 EMC9Q9Y3B6 208 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HIVEP2P31629 2446 aa12.86□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TYROBPO43914 113 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SMPD2O60906 423 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PEX11AO75192 247 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PPP3CBP16298 524 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 FPR1P21462 350 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ADH6P28332 368 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KCNJ5P48544 419 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CCT3P49368 545 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF41P51814 821 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 FOXF1Q12946 379 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TOMM34Q15785 309 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 AP1ARQ63HQ0 302 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SFXN5Q8TD22 340 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GPR119Q8TDV5 335 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR5P2Q8WZ92 322 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OSTF1Q92882 214 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZC3HAV1LQ96H79 300 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MCTS1Q9ULC4 181 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-203ENST00000437813 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TMEM114B3SHH9 223 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SCDO00767 359 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LYPLA1O75608 230 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 C6orf47O95873 294 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PLAUP00749 431 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HEXAP06865 529 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PRKCAP17252 672 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SERPINB5P36952 375 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HPCAL1P37235 193 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 EIF1P41567 113 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SUMO3P55854 103 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CAPRIN1Q14444 709 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 BEX5Q5H9J7 111 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 DCST2Q5T1A1 773 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SZRD1Q7Z422 152 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 C1orf50Q9BV19 199 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF395Q9H8N7 513 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF701Q9NV72 531 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PLCE1Q9P212 2302 aa12.84□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms