RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	NTS	P30990	170 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SLC9A3	P48764	834 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TMED10	P49755	219 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ANXA11	P50995	505 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CASP9	P55211	416 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	POLE2	P56282	527 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TMPRSS3	P57727	454 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RAE1	P78406	368 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	BTG2	P78543	158 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ID2	Q02363	134 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SF3A3	Q12874	501 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KIAA0040	Q15053	153 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ADRM1	Q16186	407 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	UGT8	Q16880	541 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DNAL1	Q4LDG9	190 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	GPAT3	Q53EU6	434 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PRAMEF20	Q5VT98	475 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RNF220	Q5VTB9	566 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	IRAK1BP1	Q5VVH5	260 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	EPGN	Q6UW88	154 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ZNF813	Q6ZN06	617 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MSANTD1	Q6ZTZ1	278 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RFPL4B	Q6ZWI9	263 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CPEB2	Q7Z5Q1	589 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CLNK	Q7Z7G1	428 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PLPP5	Q8NEB5	264 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ZFP28	Q8NHY6	868 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PPP1R35	Q8TAP8	253 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ACTRT2	Q8TDY3	377 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	THAP4	Q8WY91	577 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	EXOSC8	Q96B26	276 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KLHL29	Q96CT2	875 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FER1L6-AS2	Q96M78	137 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	LPAR4	Q99677	370 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ZNF717	Q9BY31	904 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ALOXE3	Q9BYJ1	711 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	VN1R1	Q9GZP7	353 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RIBC2	Q9H4K1	309 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	REEP4	Q9H6H4	257 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ZNF552	Q9H707	407 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SP140L	Q9H930	580 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PNO1	Q9NRX1	252 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	LANCL2	Q9NS86	450 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TEX10	Q9NXF1	929 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SH3BP4	Q9P0V3	963 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KLHL14	Q9P2G3	628 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ASH2L	Q9UBL3	628 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	UTS2R	Q9UKP6	389 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MRPS18B	Q9Y676	258 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	USP34	Q70CQ2	3546 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CEP250	Q9BV73	2442 aa		5.73	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SCN3A	Q9NY46	2000 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CNOT1	A5YKK6	2376 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SDK2	Q58EX2	2172 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	NSG1	A0A0A6YYJ2	146 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638		A4D1N5	150 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MFSD2B	A6NFX1	497 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638		A8MUA0	341 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638		A8MXE2	369 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PRSS44	E7EML9	344 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	NKX2-8	O15522	239 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MGRN1	O60291	552 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CNOT3	O75175	753 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TRIM3	O75382	744 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PRKRA	O75569	313 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CTAG2	O75638	210 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SERPINI2	O75830	405 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	KLF7	O75840	302 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SPDEF	O95238	335 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DIRAS3	O95661	229 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	GPR75	O95800	540 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TSPAN15	O95858	294 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SCGB1D1	O95968	90 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	HP	P00738	406 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	TPO	P07202	933 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	UMOD	P07911	640 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	IGFBP1	P08833	259 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	UMPS	P11172	480 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	ICAM2	P13598	275 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CSNK2A2	P19784	350 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	NCF2	P19878	526 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	DDC	P20711	480 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PRPS1L1	P21108	318 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MAOA	P21397	527 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MPI	P34949	423 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	MECP2	P51608	486 aa	Known RBP	5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CCR9	P51686	369 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	XK	P51811	444 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SEC24C	P53992	1094 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RRAD	P55042	308 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	CLDN8	P56748	225 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FOXL2	P58012	376 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	PPP2R2B	Q00005	443 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	RHAG	Q02094	409 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	FOLH1	Q04609	750 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	IL24	Q13007	206 aa		5.72	□□□□□ -1.49
ECHDC1-208	ENST00000436638	SRSF6	Q13247	344 aa	Known RBP	5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 131 ms