RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	SH2D4B	Q5SQS7	431 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651		Q6ZT83	130 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ADAMTSL2	Q86TH1	951 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MYLK4	Q86YV6	388 aa	Predicted RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NKAP	Q8N5F7	415 aa	Known RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NAT8L	Q8N9F0	302 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	WDR31	Q8NA23	367 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GATS	Q8NAP1	163 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CERS2	Q96G23	380 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	RADIL	Q96JH8	1075 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CAPS2	Q9BXY5	557 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MRPL1	Q9BYD6	325 aa	Known RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CD244	Q9BZW8	370 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	WDR41	Q9HAD4	459 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	FANCF	Q9NPI8	374 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	HIF1AN	Q9NWT6	349 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CD274	Q9NZQ7	290 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PDP1	Q9P0J1	537 aa	Predicted RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	KLHL13	Q9P2N7	655 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PRODH2	Q9UF12	536 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	SPEF1	Q9Y4P9	236 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	SNX8	Q9Y5X2	465 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PMF1-BGLAP	U3KQ54	211 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ARHGAP32	A7KAX9	2087 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ATP1B1	P05026	303 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	DHRS4L1	P0CG22	281 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CD1D	P15813	335 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PGAM1	P18669	254 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GGT1	P19440	569 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PGC	P20142	388 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	APOBEC3A	P31941	199 aa	Predicted RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	OR3A2	P47893	321 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	RFX3	P48380	749 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CARD18	P57730	90 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PSG6	Q00889	435 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	DLG1	Q12959	904 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CSTF3	Q12996	717 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	EFR3A	Q14156	821 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MLC1	Q15049	377 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ACAP2	Q15057	778 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TIMM23B	Q5SRD1	257 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	C6orf163	Q5TEZ5	329 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	C9orf135	Q5VTT2	229 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	SULT1C3	Q6IMI6	304 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GRHL2	Q6ISB3	625 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ZNF544	Q6NX49	715 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	SLC48A1	Q6P1K1	146 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ZC3HC1	Q86WB0	502 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	WDR75	Q8IWA0	830 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CCDC170	Q8IYT3	715 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PDPR	Q8NCN5	879 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	C7orf57	Q8NEG2	295 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	OR9A2	Q8NGT5	310 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ANKRD7	Q92527	254 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ZNF75CP	Q92670	426 aa	Predicted RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TM4SF18	Q96CE8	201 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MUCL1	Q96DR8	90 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CFAP36	Q96G28	342 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	C1orf147	Q96MC9	270 aa	Predicted RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TRMO	Q9BU70	441 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CDC42EP4	Q9H3Q1	356 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	COQ10B	Q9H8M1	238 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	XAB2	Q9HCS7	855 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	SAYSD1	Q9NPB0	183 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PPAN	Q9NQ55	473 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GLRX2	Q9NS18	164 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ZDHHC2	Q9UIJ5	367 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	DCTN4	Q9UJW0	460 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ICAM5	Q9UMF0	924 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	USP22	Q9UPT9	525 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MOK	Q9UQ07	419 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MTO1	Q9Y2Z2	717 aa	Known RBP	7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	RNF11	Q9Y3C5	154 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PCDHA9	Q9Y5H5	950 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	BIRC6	Q9NR09	4857 aa		7.51	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GXYLT2	A0PJZ3	443 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	UBXN8	O00124	270 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TTC4	O95801	387 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ANGPTL1	O95841	491 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	MBD3	O95983	291 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	FGG	P02679	453 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	YES1	P07947	543 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	COX5A	P20674	150 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PIK3CB	P42338	1070 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CHN2	P52757	468 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	CHRNB3	Q05901	458 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	RIN1	Q13671	783 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GLYR1	Q49A26	553 aa	Predicted RBP	7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TMEM108	Q6UXF1	575 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	C4orf22	Q6V702	233 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	USP43	Q70EL4	1123 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	FCRLA	Q7L513	359 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NUDT13	Q86X67	352 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TEX9	Q8N6V9	391 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	GBP7	Q8N8V2	638 aa	Predicted RBP	7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ATP6V1C2	Q8NEY4	427 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	OR7G2	Q8NG99	324 aa		7.5	□□□□□ -1.21
NIF3L1-206	ENST00000416651	WDR20	Q8TBZ3	569 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms