RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ZNF155Q12901 538 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 LARS2Q15031 903 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 NCF4Q15080 339 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CCDC85BQ15834 202 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 NNATQ16517 81 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 DECR1Q16698 335 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 B3GLCTQ6Y288 498 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF620Q6ZNG0 422 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 MRGPREQ86SM8 312 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 TSTD1Q8NFU3 115 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 TM9SF4Q92544 642 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CTHRC1Q96CG8 243 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CNPPD1Q9BV87 410 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 MND1Q9BWT6 205 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 NXF2Q9GZY0 626 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 RERGLQ9H628 205 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 DIMT1Q9UNQ2 313 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 STX11O75558 287 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 OR5F1O95221 314 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 LYPD3O95274 346 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 IGKV1D-16P01601 117 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 ZGLP1P0C6A0 271 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 SSTR4P31391 388 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 MAP3K8P41279 467 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CRYBB2P43320 205 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 RACK1P63244 317 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 STEAP3Q658P3 488 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 MBOAT2Q6ZWT7 520 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 SYT13Q7L8C5 426 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 RRM2BQ7LG56 351 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CDRT4Q8N9R6 151 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 FAM83FQ8NEG4 500 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 TMEM203Q969S6 136 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 KCNS3Q9BQ31 491 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 BARHL1Q9BZE3 327 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 DPH1Q9BZG8 443 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 CSNK1G3Q9Y6M4 447 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 COL6A3P12111 3177 aa14.08□□□□□ -0.16
SCAMP4-202ENST00000409472 FRYLO94915 3013 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SPAG17Q6Q759 2223 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 A0A087WV62 115 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 CDHR4A6H8M9 788 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 FAM183AA6NL82 134 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 OR5K4A6NMS3 321 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 MYL12BO14950 172 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 FOXS1O43638 330 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 PRKNO60260 465 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 RAB36O95755 333 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 AGR2O95994 175 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 NAT2P11245 290 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 NID1P14543 1247 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 MAKP20794 623 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 GFERP55789 205 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 RAB38P57729 211 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 TAGLNQ01995 201 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 FAM53BQ14153 422 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SLC25A30Q5SVS4 291 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SLC36A4Q6YBV0 504 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 VWA5B2Q8N398 1253 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF655Q8N720 491 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ZFP41Q8N8Y5 198 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 OR4F15Q8NGB8 312 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 PEX11GQ96HA9 241 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SAMD8Q96LT4 415 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 MIR1-1HGQ9H1L0 117 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 MMP27Q9H306 513 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 LMAN1LQ9HAT1 526 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 RPRD1BQ9NQG5 326 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 CCDC59Q9P031 241 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SPACA6W5XKT8 324 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SYNDIG1LA6NDD5 238 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SURF4O15260 269 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 PRODHO43272 600 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 TBX1O43435 398 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 S1PR1P21453 382 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 SEPHS1P49903 392 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 BTG2P78543 158 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 PSG6Q00889 435 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ARMC6Q6NXE6 501 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 CCBE1Q6UXH8 406 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 MCATQ8IVS2 390 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 PHC2Q8IXK0 858 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 AMER2Q8N7J2 671 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ZNF614Q8N883 585 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ANKRD19PQ9H560 264 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 DUSP22Q9NRW4 184 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 NDUFB11Q9NX14 153 aa14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-202ENST00000409472 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 WDR87Q6ZQQ6 2873 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 ZC3H12DA2A288 527 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 CTDSP2O14595 271 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 HYAL3O43820 417 aaPredicted RBP14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 SDC3O75056 442 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 LALBAP00709 142 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 THBS1P07996 1170 aa14.06□□□□□ -0.16
SCAMP4-202ENST00000409472 PTGS2P35354 604 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms