RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LANCL2Q9NS86 450 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 C14orf105Q9NVL8 296 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 PSORS1C1Q9UIG5 152 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 SNX5Q9Y5X3 404 aa13.96□□□□□ -0.18
SCAF11-204ENST00000395454 ACACAQ13085 2346 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 CCDC160A6NGH7 325 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 TTC36A6NLP5 189 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 VSTM2BA6NLU5 285 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 FMO6PO60774 539 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 RGS8P57771 180 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 CDC42P60953 191 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 RPS15P62841 145 aaKnown RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 POU6F2P78424 691 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 BTG2P78543 158 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 ST3GAL3Q11203 375 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 SERTAD2Q14140 314 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 TRAM2Q15035 370 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 C12orf73Q69YU5 71 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 ZER1Q7Z7L7 766 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 FAR1Q8WVX9 515 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 SPSB2Q99619 263 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 ALOXE3Q9BYJ1 711 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 LHPPQ9H008 270 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 WDR54Q9H977 334 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 FOLH1BQ9HBA9 442 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 RASSF1Q9NS23 344 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 AASSQ9UDR5 926 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 KCNE5Q9UJ90 142 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 NXT1Q9UKK6 140 aaKnown RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 PTRH2Q9Y3E5 179 aaKnown RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 MMACHCQ9Y4U1 282 aa13.95□□□□□ -0.18
SCAF11-204ENST00000395454 HEMK1Q9Y5R4 338 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-204ENST00000395454 LOC101059948A0A1B0GTJ6 334 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 SH3D21A4FU49 640 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 CDHR4A6H8M9 788 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PRAMEF2O60811 474 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 GSTM3P21266 225 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 MMP11P24347 488 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TRHRP34981 398 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TMBIM6P55061 237 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TAS2R41P59536 307 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 SNRPGP62308 76 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 EMX1Q04741 257 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 STX4Q12846 297 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 MAPK14Q16539 360 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TMEM201Q5SNT2 666 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 CCNJQ5T5M9 372 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 ERI1Q8IV48 349 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TMEM151BQ8IW70 566 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 C7orf57Q8NEG2 295 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 GPR151Q8TDV0 419 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PIK3R3Q92569 461 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 FGF11Q92914 225 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 SLC38A4Q969I6 547 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 RBM18Q96H35 190 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 ERVK-18Q9QC07 812 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 APC2O95996 2303 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 A0A087WUU8 490 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 IGKV3D-11A0A0A0MRZ8 115 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 IDSB3KWA1 339 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 C21orf140B9A014 251 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 RGS10O43665 173 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 FAM20BO75063 409 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 KLF7O75840 302 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 KCNK2O95069 426 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 HEXBP07686 556 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 MAOAP21397 527 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PCSK6P29122 969 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 GABRA3P34903 492 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 GSSP48637 474 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 MASP1P48740 699 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 RPS18P62269 152 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PIGFQ07326 219 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 ZNF155Q12901 538 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 DNASE1L3Q13609 305 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 DECR1Q16698 335 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 SVOPQ8N4V2 548 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 TRUB1Q8WWH5 349 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 ACOT11Q8WXI4 607 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 KIAA1143Q96AT1 154 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 PTCHD1Q96NR3 888 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 DGAT2Q96PD7 388 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 CRB3Q9BUF7 120 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 FBXO34Q9NWN3 711 aa13.94□□□□□ -0.18
SCAF11-204ENST00000395454 FARSAQ9Y285 508 aaKnown RBP13.94□□□□□ -0.18
SCAF11-204ENST00000395454 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 NPIPB9F8W1W9 429 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 H3BMQ9 156 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 AP3D1O14617 1153 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 KLF4O43474 513 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 FRS3O43559 492 aa13.93□□□□□ -0.18
SCAF11-204ENST00000395454 TRMUO75648 421 aaKnown RBP13.93□□□□□ -0.18
SCAF11-204ENST00000395454 THY1P04216 161 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms