RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ZNF41P51814 821 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ATP12AP54707 1039 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 POU6F2P78424 691 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ARHGAP11BQ3KRB8 267 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 RAET1LQ5VY80 246 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 TMEM107Q6UX40 140 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 DEF8Q6ZN54 512 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MYLK4Q86YV6 388 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 NUP43Q8NFH3 380 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 NUDT8Q8WV74 236 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 EFHD2Q96C19 240 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 TRMT61AQ96FX7 289 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MIEF1Q9NQG6 463 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 DDX18Q9NVP1 670 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ALKBH4Q9NXW9 302 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MED11Q9P086 117 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 A0A0J9YW62 118 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 VWC2LB2RUY7 222 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF195O14628 629 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF208O43345 1280 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 AQP8O94778 261 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 HPCAL1P37235 193 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 VLDLRP98155 873 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MAD2L1Q13257 205 aaPredicted RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 LSM12Q3MHD2 195 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 BHLHB9Q6PI77 547 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 SYT10Q6XYQ8 523 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 LUZP2Q86TE4 346 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MARCH3Q86UD3 253 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR5W2Q8NH69 310 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ANP32BQ92688 251 aaKnown RBP5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 MED18Q9BUE0 208 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 ATAD3AQ9NVI7 634 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 KLHL9Q9P2J3 617 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 DCHS2Q6V1P9 2916 aa5.54□□□□□ -1.52
SMARCAD1-203ENST00000394961 PKDREJQ9NTG1 2253 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ARPC4-TTLL3A0A0A6YYG9 625 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 NDUFS8O00217 210 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 NDUFB5O43674 189 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SH3BGRLO75368 114 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PDE5AO76074 875 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ALDH9A1P49189 494 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CDH13P55290 713 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ITGADQ13349 1161 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF385BQ569K4 471 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 HBMQ6B0K9 141 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 OR8J2Q8NGG1 315 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 FNDC9Q8TBE3 224 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZFP90Q8TF47 636 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 DUSP19Q8WTR2 217 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF75CPQ92670 426 aaPredicted RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 FBXW5Q969U6 566 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PPCDCQ96CD2 204 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PSD2Q9BQI7 771 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ACTR6Q9GZN1 396 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF350Q9GZX5 532 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 MID1IP1Q9NPA3 183 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 FAIMQ9NVQ4 179 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 HDGFL3Q9Y3E1 203 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 F8P00451 2351 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 GXYLT2A0PJZ3 443 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 DUXAA6NLW8 204 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SHISA9B4DS77 424 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 H7C1Q1 480 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 RNASET2O00584 256 aaKnown RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SCDO00767 359 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 AZIN1O14977 448 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 GABRA3P34903 492 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CPOXP36551 454 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 APOBEC1P41238 236 aaKnown RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 HTR3AP46098 478 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CTBP2P56545 445 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 IRX1P78414 480 aaPredicted RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 H3F3AP84243 136 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SKP2Q13309 424 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PCLAFQ15004 111 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 TOMM20Q15388 145 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 DUSP5Q16690 384 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PODNL1Q6PEZ8 512 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 FAM120BQ96EK7 910 aaKnown RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PFDN4Q9NQP4 134 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SLC35A3Q9Y2D2 325 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 AMDHD2Q9Y303 409 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 SPIN1Q9Y657 262 aaPredicted RBP5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CENPEQ02224 2701 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 TMEM114B3SHH9 223 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 H3BNH8 94 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 KIAA0513O60268 411 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CD3EP07766 207 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 PRPS1L1P21108 318 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 FOXA1P55317 472 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ZNF117Q03924 483 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 CBFBQ13951 182 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 DPY19L1Q2PZI1 675 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 C3orf33Q6P1S2 294 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 TESCQ96BS2 214 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 MUS81Q96NY9 551 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 DHRS9Q9BPW9 319 aa5.53□□□□□ -1.52
SMARCAD1-203ENST00000394961 ROPN1BQ9BZX4 212 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms