RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Snrpd2P62317 118 aaKnown RBP14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1015Q7TR94 312 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Prdm9Q96EQ9 843 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Clec3aQ9EPW4 196 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dusp13Q9QYJ7 198 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Capn1O35350 713 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hoxa9P09631 271 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hoxc5P32043 222 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Bpifb2Q8C1E1 462 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Unc119bQ8C4B4 251 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr952Q8VFD7 314 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr575Q8VH16 318 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Oas1hQ8VI97 369 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn1r71Q8VIC0 307 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dhrs4Q99LB2 279 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cela3aA2A9U8 283 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc25a25A2ASZ8 469 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1056A2AVY0 313 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dlk1Q09163 385 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 HlxQ61670 476 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Clrn3Q8BHH8 226 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tktl1Q99MX0 595 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gid4Q9CPY6 217 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 1700086D15RikQ9D9E9 151 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dnajb1Q9QYJ3 340 aaKnown RBP14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ArntlQ9WTL8 632 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr631F8VPJ9 319 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Man2b2O54782 1018 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cds1P98191 461 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tmem64Q3U145 381 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Taar7aQ5QD12 358 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Calm5Q6W3E0 140 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Adamtsl2Q7TSK7 957 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr689Q8VG18 320 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr202Q8VGQ3 307 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nup205A0A0J9YUD5 2061 aaKnown RBP14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Adam3F8VQ03 822 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 1700014D04RikJ3QMS2 983 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 GhrhrP32082 423 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Adam5Q3TTE0 751 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Kcnmb1Q8CAE3 191 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tmem5Q8VDX6 444 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ptov1Q91VU8 416 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Plpp6Q9D4F2 292 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 4930595M18RikA2RRY9 829 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Arg2O08691 354 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Wsb2O54929 404 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Pdlim3O70209 316 aaKnown RBP14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gmeb2P58929 530 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Spata6Q3U6K5 488 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 RgmaQ6PCX7 454 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1045Q7TR80 315 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Fam76bQ80XP8 339 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cdkl1Q8CEQ0 352 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Unc5aQ8K1S4 898 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rbm48Q8K2X2 371 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr649Q8VGW1 312 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dapl1Q9D757 107 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Yipf7Q9JIM5 254 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Arl6ip1Q9JKW0 203 aa14.65□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r48E9Q5D8 855 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 AlyrefO08583 255 aaKnown RBP14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Bmp6P20722 510 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Stfa2P35174 103 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Sntb2Q61235 520 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Doxl2Q6IMK7 723 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Muc19Q6JHY2 733 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Olfr1101Q7TR59 310 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Pgm2Q7TSV4 620 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Poglut1Q8BYB9 392 aaKnown RBP14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Kctd11Q8K485 232 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Rab7bQ8VEA8 199 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Wdr45Q91VM3 360 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm21731A0A286YDE9 180 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn1r184E9Q2N4 314 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r92L7N2A4 860 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 GzmeP08884 248 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Uap1l1Q3TW96 507 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gal3st4Q3V1B8 480 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmub2Q3V209 319 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Elfn2Q68FM6 823 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Kiaa1671Q8BRV5 308 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tm6sf2Q8R1J1 378 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 SvbpQ99LQ4 66 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cyp4a30bA0A087WS15 508 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Zfp619G3X9T2 1161 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Hsd3b6O35469 373 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Klrg1O88713 188 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cd48P18181 240 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gbx1P82976 418 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Enpp6Q8BGN3 440 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Znf775Q8BI73 538 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gipc3Q8R5M0 297 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tram2Q924Z5 370 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Wdr45bQ9CR39 344 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tmem269Q9D4Y8 254 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Stard5Q9EPQ7 213 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Gm11634A0A1B0GSX1 172 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Tex264E9Q137 309 aa14.64□□□□□ -0.07
Ccdc88b-201ENSMUST00000113440 Cfl1P18760 166 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms