Protein–RNA interactions for Protein: Q8VIC0

Vmn1r71, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r71Q8VIC0 Gm25239-201ENSMUST00000174915 86 ntBASIC37.99■■■■□ 3.67
Vmn1r71Q8VIC0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Vmn1r71Q8VIC0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Vmn1r71Q8VIC0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.24■■■□□ 2.91
Vmn1r71Q8VIC0 Gm24109-201ENSMUST00000175489 103 ntBASIC32.9■■■□□ 2.86
Vmn1r71Q8VIC0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
Vmn1r71Q8VIC0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.53■■■□□ 2.8
Vmn1r71Q8VIC0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Vmn1r71Q8VIC0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Vmn1r71Q8VIC0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Vmn1r71Q8VIC0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Vmn1r71Q8VIC0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Vmn1r71Q8VIC0 Gm23366-201ENSMUST00000175022 89 ntBASIC31.73■■■□□ 2.67
Vmn1r71Q8VIC0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Vmn1r71Q8VIC0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Vmn1r71Q8VIC0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Vmn1r71Q8VIC0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.87■■■□□ 2.53
Vmn1r71Q8VIC0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Vmn1r71Q8VIC0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Vmn1r71Q8VIC0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.67■■■□□ 2.5
Vmn1r71Q8VIC0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Vmn1r71Q8VIC0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.49■■■□□ 2.47
Vmn1r71Q8VIC0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Vmn1r71Q8VIC0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Vmn1r71Q8VIC0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Vmn1r71Q8VIC0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Vmn1r71Q8VIC0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Vmn1r71Q8VIC0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
Vmn1r71Q8VIC0 Psd-208ENSMUST00000224556 2034 ntBASIC30.27■■■□□ 2.44
Vmn1r71Q8VIC0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.2■■■□□ 2.42
Vmn1r71Q8VIC0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Vmn1r71Q8VIC0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vmn1r71Q8VIC0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Vmn1r71Q8VIC0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Vmn1r71Q8VIC0 Gm25238-201ENSMUST00000174914 89 ntBASIC29.99■■■□□ 2.39
Vmn1r71Q8VIC0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.94■■■□□ 2.38
Vmn1r71Q8VIC0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Vmn1r71Q8VIC0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.66■■■□□ 2.34
Vmn1r71Q8VIC0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Vmn1r71Q8VIC0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Vmn1r71Q8VIC0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Vmn1r71Q8VIC0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
Vmn1r71Q8VIC0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Vmn1r71Q8VIC0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.27■■■□□ 2.28
Vmn1r71Q8VIC0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Vmn1r71Q8VIC0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.15■■■□□ 2.26
Vmn1r71Q8VIC0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Vmn1r71Q8VIC0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Vmn1r71Q8VIC0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.1■■■□□ 2.25
Vmn1r71Q8VIC0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.03■■■□□ 2.24
Vmn1r71Q8VIC0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Vmn1r71Q8VIC0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Vmn1r71Q8VIC0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.92■■■□□ 2.22
Vmn1r71Q8VIC0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.91■■■□□ 2.22
Vmn1r71Q8VIC0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Vmn1r71Q8VIC0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.77■■■□□ 2.2
Vmn1r71Q8VIC0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Vmn1r71Q8VIC0 Gm25262-201ENSMUST00000174934 133 ntBASIC28.68■■■□□ 2.18
Vmn1r71Q8VIC0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Vmn1r71Q8VIC0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Vmn1r71Q8VIC0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Vmn1r71Q8VIC0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vmn1r71Q8VIC0 Rab21-202ENSMUST00000218831 843 ntBASIC28.58■■■□□ 2.17
Vmn1r71Q8VIC0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Vmn1r71Q8VIC0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Vmn1r71Q8VIC0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.49■■■□□ 2.15
Vmn1r71Q8VIC0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Vmn1r71Q8VIC0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Vmn1r71Q8VIC0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Vmn1r71Q8VIC0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Vmn1r71Q8VIC0 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.33■■■□□ 2.13
Vmn1r71Q8VIC0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.33■■■□□ 2.13
Vmn1r71Q8VIC0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Vmn1r71Q8VIC0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Vmn1r71Q8VIC0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Vmn1r71Q8VIC0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Vmn1r71Q8VIC0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Vmn1r71Q8VIC0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Vmn1r71Q8VIC0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Vmn1r71Q8VIC0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Vmn1r71Q8VIC0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.21■■■□□ 2.11
Vmn1r71Q8VIC0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vmn1r71Q8VIC0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.18■■■□□ 2.1
Vmn1r71Q8VIC0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
Vmn1r71Q8VIC0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Vmn1r71Q8VIC0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.11■■■□□ 2.09
Vmn1r71Q8VIC0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.06■■■□□ 2.08
Vmn1r71Q8VIC0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.03■■■□□ 2.08
Vmn1r71Q8VIC0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vmn1r71Q8VIC0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vmn1r71Q8VIC0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.98■■■□□ 2.07
Vmn1r71Q8VIC0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Vmn1r71Q8VIC0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Vmn1r71Q8VIC0 Gm26115-201ENSMUST00000175605 87 ntBASIC27.93■■■□□ 2.06
Vmn1r71Q8VIC0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vmn1r71Q8VIC0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vmn1r71Q8VIC0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Vmn1r71Q8VIC0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vmn1r71Q8VIC0 Gm8109-201ENSMUST00000194076 746 ntBASIC27.81■■■□□ 2.04
Vmn1r71Q8VIC0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.81■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms