RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 VN1R1Q9GZP7 353 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SAP130Q9H0E3 1048 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 RNF167Q9H6Y7 350 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TRIM45Q9H8W5 580 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 MED20Q9H944 212 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 UCK1Q9HA47 277 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 SLC22A11Q9NSA0 550 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 TUBA8Q9NY65 449 aaPredicted RBP3.18□□□□□ -1.9
LIG4-205ENST00000614526 NTMQ9P121 344 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 ACAD8Q9UKU7 415 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 CBLCQ9ULV8 474 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 IFT52Q9Y366 437 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 U3KQA8 63 aa3.18□□□□□ -1.9
LIG4-205ENST00000614526 KIF26BQ2KJY2 2108 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 IGHV5-10-1A0A0J9YXX1 117 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 FAM86C2PA6NEL3 165 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TRIM64A6NGJ6 449 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CLCA1A8K7I4 914 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 H0YIG0 161 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 H3BMH7 237 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DPM1O60762 260 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PRAMEF2O60811 474 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NOL3O60936 208 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 SCRG1O75711 98 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SOX30O94993 753 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NKX2-2O95096 273 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NUDT14O95848 222 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 AGR2O95994 175 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CSTAP01040 98 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 PTHP01270 115 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 MAKP20794 623 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 EPHA4P54764 986 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 HSD17B7P56937 341 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 NUP107P57740 925 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RPS3AP61247 264 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 NCS1P62166 190 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ILKQ13418 452 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TOP3AQ13472 1001 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 AQP6Q13520 282 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DOC2BQ14184 412 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SPCS2Q15005 226 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GARNL3Q5VVW2 1013 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TMEM71Q6P5X7 295 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 APOOLQ6UXV4 268 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RANBP3LQ86VV4 465 aaPredicted RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 DEPDC4Q8N2C3 294 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 LRRC17Q8N6Y2 441 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CYB561A3Q8NBI2 242 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OR13F1Q8NGS4 319 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OR13C2Q8NGS9 318 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 WDR36Q8NI36 951 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 PIGXQ8TBF5 258 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 STT3BQ8TCJ2 826 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SLC2A12Q8TD20 617 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF675Q8TD23 568 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SLC41A2Q96JW4 573 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TTTY10Q9BZA0 68 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RTN4RQ9BZR6 473 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 EPB41L1Q9H4G0 881 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DUSP21Q9H596 190 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ACOT13Q9NPJ3 140 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 RXFP3Q9NSD7 469 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TBC1D23Q9NUY8 699 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CLN6Q9NWW5 311 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 C2orf92A0A1B0GVN3 265 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 A0A1B0GWA3 101 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 A0A1B0GX78 115 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TRAPPC13A5PLN9 417 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TMEM221A6NGB7 291 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 TRIM64CA6NLI5 447 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 EFCAB7A8K855 629 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 M0R296 226 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GTPBP1O00178 669 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 WWP2O00308 870 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SYT5O00445 386 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 SCO2O43819 266 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 KIAA0513O60268 411 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 WISP1O95388 367 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GYPBP06028 91 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CD36P16671 472 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF28P17035 718 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GABRB1P18505 474 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ITIH1P19827 911 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ITPKBP27987 946 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 LIPAP38571 399 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 OMPP47874 163 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CRYZQ08257 329 aaKnown RBP3.17□□□□□ -1.9
LIG4-205ENST00000614526 LSAMPQ13449 338 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 CD226Q15762 336 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ALG10BQ5I7T1 473 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 HLA-DQA1Q5Y7H0 255 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GTF2IRD2BQ6EKJ0 949 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 C1orf94Q6P1W5 598 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 DHRS4L2Q6PKH6 230 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 GTF2IRD2Q86UP8 949 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 WDR5BQ86VZ2 330 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 C10orf53Q8N6V4 93 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 ZNF615Q8N8J6 731 aa3.17□□□□□ -1.9
LIG4-205ENST00000614526 BBS1Q8NFJ9 593 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms