RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GIN1Q9NXP7 522 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 MID2Q9UJV3 735 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 VDAC3Q9Y277 283 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 CCL27Q9Y4X3 112 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 DSCAMO60469 2012 aa15.95■□□□□ 0.14
SHKBP1-227ENST00000602011 FBN1P35555 2871 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 ANK3Q12955 4377 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 A0A1W2PRB8 838 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 GXYLT2A0PJZ3 443 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 GJE1A6NN92 205 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 KIF2AO00139 706 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 SCDO00767 359 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 CHEK2O96017 543 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 THBDP07204 575 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 FESP07332 822 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 ALOX5P09917 674 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 CRHR1P34998 444 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 FRKP42685 505 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 ASMTP46597 345 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 PRIM2P49643 509 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 CARD18P57730 90 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 HSPB3Q12988 150 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 MLC1Q15049 377 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 LRIG3Q6UXM1 1119 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 PIK3R3Q92569 461 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 SLC9A6Q92581 669 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 OSTF1Q92882 214 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 MS4A4EQ96PG1 132 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 TACO1Q9BSH4 297 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 LRTM1Q9HBL6 345 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 MED17Q9NVC6 651 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 OXSMQ9NWU1 459 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 ADAM21Q9UKJ8 722 aa15.94■□□□□ 0.14
SHKBP1-227ENST00000602011 COL6A5A8TX70 2615 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 HS3ST1O14792 307 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 KCNK2O95069 426 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 IGKV1D-16P01601 117 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 PROCP04070 461 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 CPA3P15088 417 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 PSMA4P25789 261 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 ELK4P28324 431 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 RPL3P39023 403 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 SLC6A8P48029 635 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 PRKAG1P54619 331 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 SLC18A2Q05940 514 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 PLPPR5Q32ZL2 321 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 TMEM201Q5SNT2 666 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 FAM219BQ5XKK7 198 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 HBMQ6B0K9 141 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 PPP4R4Q6NUP7 873 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 C22orf34Q6ZV56 151 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 CEP112Q8N8E3 955 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 B4GALNT2Q8NHY0 566 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 MZB1Q8WU39 189 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 CPNE4Q96A23 557 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 ARL8AQ96BM9 186 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 TRIM44Q96DX7 344 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 TRMT61AQ96FX7 289 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 EGLN2Q96KS0 407 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 FCRL1Q96LA6 429 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 STACQ99469 402 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 REPIN1Q9BWE0 567 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 ACTR6Q9GZN1 396 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 EQTNQ9NQ60 294 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 DUSP22Q9NRW4 184 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 SH3BP4Q9P0V3 963 aa15.93■□□□□ 0.14
SHKBP1-227ENST00000602011 H3BNH8 94 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 CXCL13O43927 109 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 PLIN3O60664 434 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 PDE7AQ13946 482 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 CTU2Q2VPK5 515 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 LIPMQ5VYY2 423 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 MFSD12Q6NUT3 480 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 DNAJC14Q6Y2X3 702 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 GALNT10Q86SR1 603 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 LILRA2Q8N149 483 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 SLC43A2Q8N370 569 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 ZNF527Q8NB42 609 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 SLC16A11Q8NCK7 471 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 HSD17B8Q92506 261 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 PLPPR2Q96GM1 343 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 KLHL15Q96M94 604 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 BTBD2Q9BX70 525 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 L2HGDHQ9H9P8 463 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 TBK1Q9UHD2 729 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 EMCNQ9ULC0 261 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 ACTL7BQ9Y614 415 aa15.92■□□□□ 0.14
SHKBP1-227ENST00000602011 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 AZIN1O14977 448 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 KRT16P08779 473 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 SUMO3P55854 103 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 ATP5J2P56134 94 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 RPS4XP62701 263 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 P2RY6Q15077 328 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 Q6ZSR9 355 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 COX18Q8N8Q8 333 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 EIF1ADQ8N9N8 165 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 GTPBP3Q969Y2 492 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 GIMAP5Q96F15 307 aa15.91■□□□□ 0.14
SHKBP1-227ENST00000602011 RNF145Q96MT1 663 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms