RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TMED5Q9Y3A6 229 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 POLR3HQ9Y535 204 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 GOLGA8QA0A0J9YX86 632 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 GOLGA8OA6NCC3 632 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 NPIPB8E9PQR5 432 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 GOLGA8NF8WBI6 632 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 TNFRSF21O75509 655 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 TGDSO95455 350 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 ANXA4P09525 319 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 TROVE2P10155 538 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 PEPDP12955 493 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 DSCR4P56555 118 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 CLDN20P56880 219 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 TRA2BP62995 288 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 GNGT1P63211 74 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 RFTN2Q52LD8 501 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 NOXRED1Q6NXP6 359 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 OR2M3Q8NG83 312 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 CDC26Q8NHZ8 85 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 KAT2AQ92830 837 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 FAIM2Q9BWQ8 316 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 PINK1Q9BXM7 581 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 WDR55Q9H6Y2 383 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 AKTIPQ9H8T0 292 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 FGFR1OP2Q9NVK5 253 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 SIRT5Q9NXA8 310 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 FAM53CQ9NYF3 392 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 PSME2Q9UL46 239 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 CHD3Q12873 2000 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 PCNX3Q9H6A9 2034 aa14.78□□□□□ -0.04
SHKBP1-215ENST00000597649 SDHDO14521 159 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 ABCB7O75027 752 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 LBPP18428 481 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 ALDH9A1P49189 494 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 AQP5P55064 265 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 RAE1P78406 368 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 EFR3AQ14156 821 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 EXOC3L2Q2M3D2 409 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 C6orf136Q5SQH8 315 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 GALNT18Q6P9A2 607 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF704Q6ZNC4 412 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 LRRC34Q8IZ02 419 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 MEIOBQ8N635 442 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 OR4K17Q8NGC6 315 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 EFHD2Q96C19 240 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 THOC1Q96FV9 657 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 CHMP6Q96FZ7 201 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 NPHS2Q9NP85 383 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 FLRT3Q9NZU0 649 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 MED11Q9P086 117 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 GIMAP2Q9UG22 337 aa14.77□□□□□ -0.05
SHKBP1-215ENST00000597649 SEC14L5O43304 696 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 AQP8O94778 261 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 HK1P19367 917 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 EPHA3P29320 983 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 GSTM5P46439 218 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 SLC6A8P48029 635 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 PNLIPRP2P54317 469 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 ATP5J2P56134 94 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF763Q0D2J5 394 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 KIAA0040Q15053 153 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 PON3Q15166 354 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 SMU1Q2TAY7 513 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 SLC9B1Q4ZJI4 515 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 IL23RQ5VWK5 629 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 EPGNQ6UW88 154 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 OR9A2Q8NGT5 310 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF675Q8TD23 568 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 C16orf78Q8WTQ4 265 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 TMEM171Q8WVE6 324 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 SIKE1Q9BRV8 207 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 TMEM204Q9BSN7 226 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 C1orf50Q9BV19 199 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 DCTN4Q9UJW0 460 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 UTS2RQ9UKP6 389 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 PROCRQ9UNN8 238 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 WBP11Q9Y2W2 641 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 ZNF780BQ9Y6R6 833 aa14.76□□□□□ -0.05
SHKBP1-215ENST00000597649 OR2M5A3KFT3 312 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 RNF223E7ERA6 249 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 SCO2O43819 266 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 FADS1O60427 444 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 PRPS2P11908 318 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 IL12BP29460 328 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 IDH3AP50213 366 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 EEFSECP57772 596 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 EMX2Q04743 252 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 C2orf80Q0P641 193 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 HEPACAMQ14CZ8 416 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 BEX5Q5H9J7 111 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 RAET1LQ5VY80 246 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 HEPHL1Q6MZM0 1159 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 STAC2Q6ZMT1 411 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 FAM214BQ7L5A3 538 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 MAVSQ7Z434 540 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 SPATA19Q7Z5L4 167 aa14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 SLC44A2Q8IWA5 706 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-215ENST00000597649 PHC2Q8IXK0 858 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms