RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 SPAG7O75391 227 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 AQP8O94778 261 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 SOX30O94993 753 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 LINC00032P0C843 101 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 BCKDHAP12694 445 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 HPGDP15428 266 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 PPP3CBP16298 524 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 IL11P20809 199 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 SERPINB5P36952 375 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 EIF1AXP47813 144 aaKnown RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 RAC1P63000 192 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 IFFO1Q0D2I5 559 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 DUSP5Q16690 384 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 PLPPR5Q32ZL2 321 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 GALNTL6Q49A17 601 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 ESPNLQ6ZVH7 1005 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 EXOC3L1Q86VI1 746 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 NATD1Q8N6N6 113 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 COX18Q8N8Q8 333 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 SLC16A11Q8NCK7 471 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 OR10D3Q8NH80 312 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 CLHC1Q8NHS4 586 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 TWIST2Q8WVJ9 160 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 MARK4Q96L34 752 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 PPP3R2Q96LZ3 170 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 STACQ99469 402 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 MECRQ9BV79 373 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 PARD6BQ9BYG5 372 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 PRRG4Q9BZD6 226 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 EML4Q9HC35 981 aaKnown RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 MED17Q9NVC6 651 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 BAIAP2L1Q9UHR4 511 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 JMJD1CQ15652 2540 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 CADP27708 2225 aa12.62□□□□□ -0.39
HDAC5-203ENST00000586339 FN1P02751 2386 aaKnown RBP12.62□□□□□ -0.39
HDAC5-203ENST00000586339 HIVEP2P31629 2446 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ESPNB1AK53 854 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ADAMDEC1O15204 470 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 SS18L1O75177 396 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 CHRNGP07510 517 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ME2P23368 584 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PSMA4P25789 261 aaKnown RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ELK4P28324 431 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 CTBP2P56545 445 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 POU6F2P78424 691 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 CTU2Q2VPK5 515 aaKnown RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 UGT3A2Q3SY77 523 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PDSS1Q5T2R2 415 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 MTERF4Q7Z6M4 381 aaKnown RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 DDIASQ8IXT1 998 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PSMA8Q8TAA3 256 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 JADE3Q92613 823 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ROPN1BQ9BZX4 212 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 OR10A4Q9H209 315 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 ROPN1Q9HAT0 212 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 PLSCR4Q9NRQ2 329 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 SIRT3Q9NTG7 399 aaPredicted RBP12.61□□□□□ -0.39
HDAC5-203ENST00000586339 TRAF6Q9Y4K3 522 aa12.61□□□□□ -0.39
HDAC5-203ENST00000586339 FAM171A2A8MVW0 826 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 PIP5K1BO14986 540 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 GMFGO60234 142 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 SMPD2O60906 423 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 LYPLA1O75608 230 aaPredicted RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 SYNGR4O95473 234 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 HMGN2P05204 90 aaKnown RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 KRT16P08779 473 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 SLC6A8P48029 635 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 ACKR1Q16570 336 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 XKR7Q5GH72 579 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 ARL13AQ5H913 290 aaPredicted RBP12.6□□□□□ -0.39
HDAC5-203ENST00000586339 CPTPQ5TA50 214 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 ZNF550Q7Z398 422 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 ZAR1Q86SH2 424 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 GALNT10Q86SR1 603 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 MREGQ8N565 214 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 GATSQ8NAP1 163 aa12.6□□□□□ -0.39
HDAC5-203ENST00000586339 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms