RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ADGRG3Q86Y34 549 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR4N5Q8IXE1 308 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR2L13Q8N349 312 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TRIML2Q8N7C3 387 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PCYOX1LQ8NBM8 494 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 C17orf47Q8NEP4 570 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NFAM1Q8NET5 270 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 B3GNT7Q8NFL0 401 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR9I1Q8NGQ6 314 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 OR8K3Q8NH51 312 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 M1APQ8TC57 530 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SFXN5Q8TD22 340 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SNRNP27Q8WVK2 155 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TSLPQ969D9 159 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 UCN3Q969E3 161 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 TMEM125Q96AQ2 219 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 CIDECQ96AQ7 238 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ROPN1LQ96C74 230 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ELP4Q96EB1 424 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SENP5Q96HI0 755 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 IMMP1LQ96LU5 166 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FER1L6-AS2Q96M78 137 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 PANX1Q96RD7 426 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 WDR77Q9BQA1 342 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 CCDC106Q9BWC9 280 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SEMA4CQ9C0C4 833 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 GLIPR2Q9H4G4 154 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 C3orf14Q9HBI5 128 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 SERHLQ9NQF3 203 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 P4HTMQ9NXG6 502 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 CCDC167Q9P0B6 97 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ARMCX1Q9P291 453 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 C5AR2Q9P296 337 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 COPS7AQ9UBW8 275 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF639Q9UID6 485 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 LEF1Q9UJU2 399 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FBXL4Q9UKA2 621 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 VPS4AQ9UN37 437 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 G3BP2Q9UN86 482 aaKnown RBP5.31□□□□□ -1.56
SCAF11-213ENST00000550629 NDUFAF1Q9Y375 327 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 FRYQ5TBA9 3013 aa5.31□□□□□ -1.56
SCAF11-213ENST00000550629 ANKRD11Q6UB99 2663 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ASPDHA6ND91 283 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OR2W5A6NFC9 320 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 RFXANKO14593 260 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MGST3O14880 152 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 EMC8O43402 210 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 HNRNPCL1O60812 293 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 COQ9O75208 318 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 DDAH2O95865 285 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 KRT16P08779 473 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 COX4I1P13073 169 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CAPN3P20807 821 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 S1PR1P21453 382 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 NT5EP21589 574 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 UQCRC2P22695 453 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 PPIBP23284 216 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 GATA3P23771 443 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 PTPN6P29350 595 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OTX2P32243 289 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ANXA11P50995 505 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 GPR143P51810 404 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SLC37A1P57057 533 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 TMPRSS3P57727 454 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SLC26A5P58743 744 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 DCAF7P61962 342 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 RPS18P62269 152 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 HBA1P69905 142 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MRPS35P82673 323 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ID2Q02363 134 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 GABPB1Q06547 395 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CDC20Q12834 499 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SF3A3Q12874 501 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 HSPB3Q12988 150 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 AIMP2Q13155 320 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ATP1A4Q13733 1029 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF750Q32MQ0 723 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 TRMT5Q32P41 509 aaKnown RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CD300EQ496F6 205 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 VPS26BQ4G0F5 336 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 DCAF10Q5QP82 559 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 LRIF1Q5T3J3 769 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ZCCHC12Q6PEW1 402 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 HACD2Q6Y1H2 254 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 HSDL2Q6YN16 418 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 TRPM8Q7Z2W7 1104 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF551Q7Z340 670 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SNX32Q86XE0 403 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 APLFQ8IW19 511 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF615Q8N8J6 731 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 CLEC1AQ8NC01 280 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OR5L2Q8NGL0 311 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OR4A15Q8NGL6 344 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OR1N1Q8NGS0 311 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 OR9A2Q8NGT5 310 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 MIPOL1Q8TD10 442 aa5.3□□□□□ -1.56
SCAF11-213ENST00000550629 SLC2A12Q8TD20 617 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms