RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 OR10D3Q8NH80 312 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 C11orf24Q96F05 449 aaPredicted RBP10.28□□□□□ -0.76
RAB5C-203ENST00000546881 PLPPR2Q96GM1 343 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 SH3YL1Q96HL8 342 aaPredicted RBP10.28□□□□□ -0.76
RAB5C-203ENST00000546881 GMPPAQ96IJ6 420 aaPredicted RBP10.28□□□□□ -0.76
RAB5C-203ENST00000546881 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 GATA5Q9BWX5 397 aaPredicted RBP10.28□□□□□ -0.76
RAB5C-203ENST00000546881 ACTR6Q9GZN1 396 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 CXorf56Q9H5V9 222 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 MYNNQ9NPC7 610 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 FANCFQ9NPI8 374 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 SIRT5Q9NXA8 310 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 DSCAMO60469 2012 aa10.28□□□□□ -0.76
RAB5C-203ENST00000546881 ARID1AO14497 2285 aa10.27□□□□□ -0.76
RAB5C-203ENST00000546881 UBFD1O14562 309 aaKnown RBP10.27□□□□□ -0.77
RAB5C-203ENST00000546881 TNFSF11O14788 317 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 PDPK1O15530 556 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 KLF4O43474 513 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 SS18L1O75177 396 aaPredicted RBP10.27□□□□□ -0.77
RAB5C-203ENST00000546881 SEC22BO75396 215 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 CHEK2O96017 543 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 BPGMP07738 259 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 PRPS2P11908 318 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 SERPINB4P48594 390 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 ZNF41P51814 821 aaPredicted RBP10.27□□□□□ -0.77
RAB5C-203ENST00000546881 CTU2Q2VPK5 515 aaKnown RBP10.27□□□□□ -0.77
RAB5C-203ENST00000546881 VPS26BQ4G0F5 336 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 NOXRED1Q6NXP6 359 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 STK32CQ86UX6 486 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 AGR3Q8TD06 166 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 CIDECQ96AQ7 238 aaPredicted RBP10.27□□□□□ -0.77
RAB5C-203ENST00000546881 RNF145Q96MT1 663 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 TRMOQ9BU70 441 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 PLSCR4Q9NRQ2 329 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 FAM53CQ9NYF3 392 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 TAS2R7Q9NYW3 318 aa10.27□□□□□ -0.77
RAB5C-203ENST00000546881 A0A087WZY1 265 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 IGLV3-32A0A0A0MS00 114 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 TMEM120BA0PK00 339 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 SERTM1A2A2V5 107 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 HS3ST1O14792 307 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 AKAP10O43572 662 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 NPHS1O60500 1241 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 RSL1D1O76021 490 aaKnown RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 OXSR1O95747 527 aaPredicted RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 HSPA4LO95757 839 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 HPGDP15428 266 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 ZNF17P17021 662 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 ME2P23368 584 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 OCRLQ01968 901 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 CHI3L2Q15782 390 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 TMEM44Q2T9K0 475 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 HBMQ6B0K9 141 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 BEND4Q6ZU67 534 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 IKBIPQ70UQ0 350 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 NUP43Q8NFH3 380 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 OR4C3Q8NH37 302 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 OR2V1Q8NHB1 315 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 JADE3Q92613 823 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 AKAP1Q92667 903 aaKnown RBP eCLIP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 OTUB1Q96FW1 271 aaPredicted RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 EGLN2Q96KS0 407 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 NPAS1Q99742 590 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 TACO1Q9BSH4 297 aaKnown RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 VIPAS39Q9H9C1 493 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 PAQR5Q9NXK6 330 aaPredicted RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 LAMP3Q9UQV4 416 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 RAI1Q7Z5J4 1906 aaPredicted RBP10.26□□□□□ -0.77
RAB5C-203ENST00000546881 HEATR5AQ86XA9 2040 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 PCNX3Q9H6A9 2034 aa10.26□□□□□ -0.77
RAB5C-203ENST00000546881 JMJD1CQ15652 2540 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 A0A1W2PRB8 838 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 TTC36A6NLP5 189 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 ALG1L2C9J202 215 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 SCDO00767 359 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 AZIN1O14977 448 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 BIRC5O15392 142 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 CLOCKO15516 846 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 CHRNGP07510 517 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 UROSP10746 265 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 ACP2P11117 423 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 SFTPDP35247 375 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 RNF144AP50876 292 aaPredicted RBP10.25□□□□□ -0.77
RAB5C-203ENST00000546881 MANFP55145 182 aaKnown RBP10.25□□□□□ -0.77
RAB5C-203ENST00000546881 RPS4XP62701 263 aaKnown RBP10.25□□□□□ -0.77
RAB5C-203ENST00000546881 RAC1P63000 192 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 TNK1Q13470 666 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 VEZF1Q14119 521 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 CAPRIN1Q14444 709 aaKnown RBP10.25□□□□□ -0.77
RAB5C-203ENST00000546881 TSC22D1Q15714 1073 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 TNFAIP8L3Q5GJ75 292 aa10.25□□□□□ -0.77
RAB5C-203ENST00000546881 ARL13AQ5H913 290 aaPredicted RBP10.25□□□□□ -0.77
RAB5C-203ENST00000546881 PDSS1Q5T2R2 415 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms