RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 CLHC1Q8NHS4 586 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 POC1BQ8TC44 478 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 ZBTB8AQ96BR9 441 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 S100PBPQ96BU1 408 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 CHMP6Q96FZ7 201 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 C16orf58Q96GQ5 468 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
CMSS1-202ENST00000463526 GLRX2Q9NS18 164 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 PAQR5Q9NXK6 330 aaPredicted RBP13.67□□□□□ -0.22
CMSS1-202ENST00000463526 DCDC2Q9UHG0 476 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 FIS1Q9Y3D6 152 aa13.67□□□□□ -0.22
CMSS1-202ENST00000463526 RAI1Q7Z5J4 1906 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 A0A1W2PPM1 405 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 RIPK2O43353 540 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 KCNK2O95069 426 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 PAX1P15863 534 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 PSMA4P25789 261 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 SHC1P29353 583 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 AGTR1P30556 359 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 RPS4XP62701 263 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 DUSP5Q16690 384 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 CLEC12BQ2HXU8 276 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 GTF2IRD2BQ6EKJ0 949 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 FRMD7Q6ZUT3 714 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 CXXC5Q7LFL8 322 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 NUFIP2Q7Z417 695 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 GTF2IRD2Q86UP8 949 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 ATP6V1C2Q8NEY4 427 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 B4GALNT2Q8NHY0 566 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 ACMSDQ8TDX5 336 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 JADE3Q92613 823 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 NEUROG1Q92886 237 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 CCDC126Q96EE4 140 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 REXO5Q96IC2 774 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 KLHL15Q96M94 604 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 TSSK3Q96PN8 268 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 C12orf65Q9H3J6 166 aaKnown RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 LRTM1Q9HBL6 345 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 PSMC3IPQ9P2W1 217 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-202ENST00000463526 BAIAP2L1Q9UHR4 511 aa13.66□□□□□ -0.22
CMSS1-202ENST00000463526 SONP18583 2426 aaKnown RBP13.65□□□□□ -0.22
CMSS1-202ENST00000463526 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 SCDO00767 359 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 CRLF1O75462 422 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 ALOX5P09917 674 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 PSMB1P20618 241 aaKnown RBP13.65□□□□□ -0.22
CMSS1-202ENST00000463526 CDKN1AP38936 164 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 MAP3K8P41279 467 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 PRIM2P49643 509 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 CD226Q15762 336 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 TMEM201Q5SNT2 666 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 TRMT10CQ7L0Y3 403 aaKnown RBP13.65□□□□□ -0.22
CMSS1-202ENST00000463526 TUSC5Q8IXB3 177 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 COX18Q8N8Q8 333 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 CCDC63Q8NA47 563 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 FAM110BQ8TC76 370 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 ACTRT2Q8TDY3 377 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 ABHD3Q8WU67 409 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 GTPBP3Q969Y2 492 aaKnown RBP13.65□□□□□ -0.22
CMSS1-202ENST00000463526 GIMAP5Q96F15 307 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 MS4A4EQ96PG1 132 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 SRXN1Q9BYN0 137 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
CMSS1-202ENST00000463526 REEP4Q9H6H4 257 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 UBQLN4Q9NRR5 601 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 C1orf109Q9NX04 203 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 GIN1Q9NXP7 522 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 RNF115Q9Y4L5 304 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 CCL27Q9Y4X3 112 aa13.65□□□□□ -0.22
CMSS1-202ENST00000463526 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 SLC28A1O00337 649 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 GLRA3O75311 464 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 NUDT14O95848 222 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 PROCP04070 461 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 CD3EP07766 207 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 NGFRP08138 427 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 SOD3P08294 240 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 UROSP10746 265 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 IL32P24001 234 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 KRTAP1-1Q07627 177 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 FAPQ12884 760 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 FOXF1Q12946 379 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 ATG4DQ86TL0 474 aaPredicted RBP13.64□□□□□ -0.23
CMSS1-202ENST00000463526 TRABD2AQ86V40 505 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 LILRB1Q8NHL6 650 aaPredicted RBP13.64□□□□□ -0.23
CMSS1-202ENST00000463526 PHOSPHO1Q8TCT1 267 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
CMSS1-202ENST00000463526 HOXB13Q92826 284 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms