RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 GALNT10Q86SR1 603 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 MARCH3Q86UD3 253 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 FUNDC1Q8IVP5 155 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 CLEC4FQ8N1N0 589 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 OR4C3Q8NH37 302 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.69
VPS52-213ENST00000461743 ROPN1LQ96C74 230 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 ZNF317Q96PQ6 595 aaPredicted RBP10.77□□□□□ -0.69
VPS52-213ENST00000461743 PSMG3-AS1Q96PY0 264 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 TRNT1Q96Q11 434 aaKnown RBP10.77□□□□□ -0.69
VPS52-213ENST00000461743 PIGQQ9BRB3 760 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 UGT2B28Q9BY64 529 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 PAIP1Q9H074 479 aaKnown RBP10.77□□□□□ -0.69
VPS52-213ENST00000461743 SAP130Q9H0E3 1048 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 DSN1Q9H410 356 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 TPT1P8Q9HAU6 139 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 PNPLA3Q9NST1 481 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 FBXO34Q9NWN3 711 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 CALML5Q9NZT1 146 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 P2RX2Q9UBL9 471 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 LEF1Q9UJU2 399 aaPredicted RBP10.77□□□□□ -0.69
VPS52-213ENST00000461743 CORO2BQ9UQ03 480 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 WDR45Q9Y484 360 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 DTNAQ9Y4J8 743 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 HRH3Q9Y5N1 445 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 KCNE3Q9Y6H6 103 aa10.77□□□□□ -0.69
VPS52-213ENST00000461743 C2orf72A6NCS6 295 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 AHRRA9YTQ3 701 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 B4DXG7 233 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 SLC22A2O15244 555 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 EIF4E2O60573 245 aaKnown RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 GSNP06396 782 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 CPN1P15169 458 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 BMP7P18075 431 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 HK1P19367 917 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 CAPN3P20807 821 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 ADSLP30566 484 aaPredicted RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 ADH7P40394 386 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 ZNF41P51814 821 aaPredicted RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 MNAT1P51948 309 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 GNGT1P63211 74 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 FUT5Q11128 374 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 BCL2A1Q16548 175 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 WIPI1Q5MNZ9 446 aaPredicted RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 PRAMEF8Q5VWM4 474 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 PRAMEF7Q5VXH5 474 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 TYW3Q6IPR3 259 aaKnown RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 CGB2Q6NT52 195 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 FRRS1Q6ZNA5 592 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 LRRC74BQ6ZQY2 392 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 YRDCQ86U90 279 aaKnown RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 LACC1Q8IV20 430 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 ULK2Q8IYT8 1036 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 ZNF619Q8N2I2 560 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 DPP10Q8N608 796 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 DUSP19Q8WTR2 217 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 XAGE5Q8WWM1 108 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 ZBTB8AQ96BR9 441 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 THOC1Q96FV9 657 aaKnown RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 TIMP4Q99727 224 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 RTN4RQ9BZR6 473 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 SLC52A3Q9NQ40 469 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 STOML1Q9UBI4 398 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 SLC35A3Q9Y2D2 325 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
VPS52-213ENST00000461743 CENPEQ02224 2701 aa10.76□□□□□ -0.69
VPS52-213ENST00000461743 CRYBG3Q68DQ2 2970 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 TMEM247A6NEH6 219 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 SERINC4A6NH21 518 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ANGPT2O15123 496 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ZIC3O60481 467 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ZG16O60844 167 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 TNFRSF21O75509 655 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 UGT2B17O75795 530 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 RNF224P0DH78 156 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 UBL4AP11441 157 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 BMP2P12643 396 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 PEPDP12955 493 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ELK4P28324 431 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 EIF1P41567 113 aaKnown RBP10.75□□□□□ -0.69
VPS52-213ENST00000461743 P2RX1P51575 399 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 MVDP53602 400 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 CRISP3P54108 245 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 B3GALT5-AS1P59052 145 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 DSTNP60981 165 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ADORA2A-AS1P86434 159 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ZNF117Q03924 483 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ART3Q13508 389 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 FGFBP1Q14512 234 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 MAPRE2Q15555 327 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 GPR68Q15743 365 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 CD226Q15762 336 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 ACSF3Q4G176 576 aaPredicted RBP10.75□□□□□ -0.69
VPS52-213ENST00000461743 GPAT3Q53EU6 434 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 COQ5Q5HYK3 327 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS52-213ENST00000461743 RAET1LQ5VY80 246 aa10.75□□□□□ -0.69
VPS52-213ENST00000461743 OR5M10Q6IEU7 315 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms