RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DUX4L2P0CJ85 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4L3P0CJ86 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4L5P0CJ88 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4L6P0CJ89 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4L7P0CJ90 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PKMP14618 531 aaKnown RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 TCF4P15884 667 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 MALP21145 153 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CCNCP24863 283 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 COL8A2P25067 703 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PTPN3P26045 913 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF81P51508 661 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CTBP2P56545 445 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 FBXW4P57775 412 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ZBED6P86452 979 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 IL1RL1Q01638 556 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 WASHC5Q12768 1159 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 RAB39AQ14964 217 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ARMCX4Q5H9R4 360 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF311Q5JNZ3 666 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 TCTEX1D4Q5JR98 221 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 C6orf163Q5TEZ5 329 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 NCBP2-AS2Q69YL0 99 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 TIGD3Q6B0B8 471 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 MFSD12Q6NUT3 480 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DNAJC24Q6P3W2 148 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4L9Q6RFH8 374 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ANGPTL8Q6UXH0 198 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 RAD9BQ6WBX8 426 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF782Q6ZMW2 699 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CCDC80Q76M96 950 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 BHLHA15Q7RTS1 189 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 GLT6D1Q7Z4J2 308 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 IRF2BP2Q7Z5L9 587 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PHF13Q86YI8 300 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DCUN1D3Q8IWE4 304 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CNTN4Q8IWV2 1026 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 LMNTD2Q8IXW0 634 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 SDR9C7Q8NEX9 313 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 OR5L2Q8NGL0 311 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 OR1J4Q8NGS1 313 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 KIF18AQ8NI77 898 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 HMGCLL1Q8TB92 370 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PTPMT1Q8WUK0 201 aaPredicted RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 GIMAP1Q8WWP7 306 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 MPP4Q96JB8 637 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 RUNDC3BQ96NL0 473 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PRAP1Q96NZ9 151 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PCDHB18PQ96TA0 734 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 RAB1BQ9H0U4 201 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 VPS37BQ9H9H4 285 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 FANCFQ9NPI8 374 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 WWOXQ9NZC7 414 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 DUX4Q9UBX2 424 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 LCMT1Q9UIC8 334 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PTBP2Q9UKA9 531 aaKnown RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 FOXJ3Q9UPW0 622 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF148Q9UQR1 794 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 RRP15Q9Y3B9 282 aaKnown RBP4.2□□□□□ -1.74
SDCBP-205ENST00000447267 PKP3Q9Y446 797 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ARL5AQ9Y689 179 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 CLCA3PQ9Y6N3 262 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 ALMS1Q8TCU4 4167 aa4.2□□□□□ -1.74
SDCBP-205ENST00000447267 GOLGA8QA0A0J9YX86 632 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 A0A1B0GVL5 298 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 LOC285095A0A1B0GVY8 99 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 CCDC151A5D8V7 595 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GOLGA8OA6NCC3 632 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GOLGA8NF8WBI6 632 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GOLGA8RI6L899 631 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 M0R1B8 84 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 KCNK1O00180 336 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 SEC14L5O43304 696 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 RGS14O43566 566 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 ANGPTL7O43827 346 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 LCMT2O60294 686 aaKnown RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GALR3O60755 368 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 AVILO75366 819 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 E2F6O75461 281 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 LYZL6O75951 148 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GFPT2O94808 682 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 SNX4O95219 450 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 PLGP00747 810 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 RBMY1CP0DJD4 496 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 ANPEPP15144 967 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 PECAM1P16284 738 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 IL11P20809 199 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 SYT1P21579 422 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 PSMA2P25787 234 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 FOXN2P32314 431 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 CASP3P42574 277 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 GPR6P46095 362 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 MTNR1AP48039 350 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 KHKP50053 298 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 IDH3GP51553 393 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 HNRNPFP52597 415 aaKnown RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 SNRPD2P62316 118 aaKnown RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 IFI35P80217 286 aaPredicted RBP4.19□□□□□ -1.74
SDCBP-205ENST00000447267 CDR2Q01850 454 aa4.19□□□□□ -1.74
SDCBP-205ENST00000447267 TBL3Q12788 808 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms