RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 HFEQ30201 348 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 ZNF658BQ4V348 819 aaPredicted RBP2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 AGKQ53H12 422 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 KHDRBS2Q5VWX1 349 aaKnown RBP2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 TRPM8Q7Z2W7 1104 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 GOLGA7Q7Z5G4 137 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 CNTN4Q8IWV2 1026 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 RNF175Q8N4F7 328 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 CSNK1A1LQ8N752 337 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 TMEM185AQ8NFB2 350 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 KRT35Q92764 455 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 MARC2Q969Z3 335 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 C18orf25Q96B23 403 aaPredicted RBP2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 TBC1D31Q96DN5 1066 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 SPATA13Q96N96 652 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 PLEKHF1Q96S99 279 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 NDUFAF3Q9BU61 184 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 SIRPDQ9H106 197 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 HOMER3Q9NSC5 361 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 DUS2Q9NX74 493 aaKnown RBP2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 ZNF221Q9UK13 617 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 TDRKHQ9Y2W6 561 aaKnown RBP2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 THSD7AQ9UPZ6 1657 aa2.84□□□□□ -1.95
AC003001.1-201ENST00000443247 PARD3Q8TEW0 1356 aa2.84□□□□□ -1.96
AC003001.1-201ENST00000443247 PLEKHG1Q9ULL1 1385 aa2.84□□□□□ -1.96
AC003001.1-201ENST00000443247 WNK3Q9BYP7 1800 aa2.84□□□□□ -1.96
AC003001.1-201ENST00000443247 USP6P35125 1406 aa2.84□□□□□ -1.96
AC003001.1-201ENST00000443247 ADGRL3Q9HAR2 1447 aa2.84□□□□□ -1.96
AC003001.1-201ENST00000443247 SHANK3Q9BYB0 1731 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 COL14A1Q05707 1796 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 MT-ND3P03897 115 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 NR2C1P13056 603 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 STMN1P16949 149 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 FUT3P21217 361 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 ARF5P84085 180 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 SRYQ05066 204 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 ZP4Q12836 540 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 IL17AQ16552 155 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 CYP51A1Q16850 503 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 DNAJC21Q5F1R6 531 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 TIFABQ6ZNK6 161 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 P4HA3Q7Z4N8 544 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 CCDC36Q8IYA8 594 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 WDR36Q8NI36 951 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 TADA1Q96BN2 335 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 COQ7Q99807 217 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 XPO4Q9C0E2 1151 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 NACA2Q9H009 215 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 MID1IP1Q9NPA3 183 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 CYP39A1Q9NYL5 469 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 EHFQ9NZC4 300 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 EXOSC1Q9Y3B2 195 aaKnown RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 KIF1BO60333 1816 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 KANK1Q14678 1352 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 MTUS2Q5JR59 1369 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 ZFYVE9O95405 1425 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 NOS1P29475 1434 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 CEP162Q5TB80 1403 aa2.83□□□□□ -1.96
AC003001.1-201ENST00000443247 COL4A4P53420 1690 aaPredicted RBP2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 QSER1Q2KHR3 1735 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 KNDC1Q76NI1 1749 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 WDR90Q96KV7 1748 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 SBF2Q86WG5 1849 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 TRBV2A0A0J9YWF9 115 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 TRIM49D1C9J1S8 452 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 IMPA2O14732 288 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 VEGFDO43915 354 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 SLC35G4P0C7Q5 338 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 SLC6A8P48029 635 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 CAV2P51636 162 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 C1QTNF8P60827 252 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 LRIT3Q3SXY7 679 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 SLX4IPQ5VYV7 408 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 ARFGAP2Q8N6H7 521 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 TEX9Q8N6V9 391 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 BBS1Q8NFJ9 593 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 CCDC47Q96A33 483 aaKnown RBP2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 NOL4LQ96MY1 436 aaPredicted RBP2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 CNPY3Q9BT09 278 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 CCSER1Q9C0I3 900 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 PTGES2Q9H7Z7 377 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 PNO1Q9NRX1 252 aaKnown RBP2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 HMG20BQ9P0W2 317 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 EPS15L1Q9UBC2 864 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 DUSP12Q9UNI6 340 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 ABCC5O15440 1437 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 ADGRL2O95490 1459 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 E9PCH4 1651 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 PIK3C2AO00443 1686 aa2.82□□□□□ -1.96
AC003001.1-201ENST00000443247 FBLL1A6NHQ2 334 aaKnown RBP2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 RAMP1O60894 148 aa2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 IGKV3-11P04433 115 aa2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 ZNF17P17021 662 aa2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 RBMXP38159 391 aaKnown RBP2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 GPC3P51654 580 aa2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 HERVK_113P63132 956 aa2.81□□□□□ -1.96
AC003001.1-201ENST00000443247 ERVK-8P63133 956 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms