RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SH3YL1Q96HL8 342 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CPB2Q96IY4 423 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF512Q96ME7 567 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 GLT1D1Q96MS3 346 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM56Q96MV1 263 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF599Q96NL3 588 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DUX5Q96PT3 197 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR2V2Q96R30 315 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 HOPXQ9BPY8 73 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 EBF4Q9BQW3 602 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC35A5Q9BS91 424 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM109Q9BVC6 243 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRMT61BQ9BVS5 477 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PHF7Q9BWX1 381 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TM6SF1Q9BZW5 370 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ELOVL4Q9GZR5 314 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SRRQ9GZT4 340 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MIXL1Q9H2W2 232 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC32A1Q9H598 525 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF696Q9H7X3 374 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TLE6Q9H808 572 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 NT5DC2Q9H857 520 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 APMAPQ9HDC9 416 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR2S2Q9NQN1 319 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 DYRK4Q9NR20 520 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SMOXQ9NWM0 555 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 OXSMQ9NWU1 459 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 RDH8Q9NYR8 311 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 WSB2Q9NYS7 404 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ERAP1Q9NZ08 941 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MSRAQ9UJ68 235 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNG2Q9UJ96 466 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 KLHL21Q9UJP4 597 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF225Q9UK10 706 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PACSIN3Q9UKS6 424 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 FBXL3Q9UKT7 428 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNK6Q9Y257 313 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 MRPS33Q9Y291 106 aaKnown RBP4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC27A6Q9Y2P4 619 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 ALG6Q9Y672 507 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CEPT1Q9Y6K0 416 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 URGCP-MRPS24S4R325 110 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM56-RWDD3S4R434 201 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 COL4A3Q01955 1670 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PLCH1Q4KWH8 1693 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 FMN2Q9NZ56 1722 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 CACNA1FO60840 1977 aa4.4□□□□□ -1.71
HMGB3P9-201ENST00000441799 PSME4Q14997 1843 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TNS3Q68CZ2 1445 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ISPDA4D126 451 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CENPXA8MT69 81 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 A8MUA0 341 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 A8MUI8 341 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 BHLHE40O14503 412 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CDIPTO14735 213 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CLIC2O15247 247 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 KLK10O43240 276 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SPRY1O43609 319 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PMPCBO75439 489 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CELF2O95319 508 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CTDNEP1O95476 244 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PTTG1O95997 202 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MOCS2O96007 188 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 IFNA21P01568 189 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANXA2P07355 339 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ALPIP09923 528 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 METTL15P1P0C7V9 234 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 GTF2F2P13984 249 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 KCNE1P15382 129 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CEBPBP17676 345 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TSPAN8P19075 237 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ATP6V1B2P21281 511 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 DRD4P21917 467 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 TGM2P21980 687 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ACKR3P25106 362 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 GABRB3P28472 473 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PRDX6P30041 224 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 UQCRC1P31930 480 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLSTP36957 453 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 STK19P49842 368 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RPL14P50914 215 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAB28P51157 221 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CHN2P52757 468 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PTTG1IPP53801 180 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 PNLIPRP2P54317 469 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 BCAT1P54687 386 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 ATP5J2P56134 94 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 DLX5P56178 289 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 SESN2P58004 480 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 MLF1P58340 268 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 LSM6P62312 80 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 HERV-K104P63124 156 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 IL5RAQ01344 420 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 OGDHQ02218 1023 aa4.39□□□□□ -1.71
HMGB3P9-201ENST00000441799 CNTN1Q12860 1018 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms