RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	DUX5	Q96PT3	197 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SLC6A7	Q99884	636 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	EFCAB11	Q9BUY7	163 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HDHD5	Q9BXW7	423 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	DDX47	Q9H0S4	455 aa	Known RBP	7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CXorf36	Q9H7Y0	433 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	DDX31	Q9H8H2	851 aa	Known RBP	7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	UNKL	Q9H9P5	680 aa	Known RBP	7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	AP4B1	Q9Y6B7	739 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ATP23	Q9Y6H3	246 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651		U3KQE9	123 aa		7.55	□□□□□ -1.2
NIF3L1-206	ENST00000416651	LOC105371242	A0A075B767	164 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	MAGEB16	A2A368	324 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	MIF4GD	A9UHW6	222 aa	Known RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	GOLGA6L19	H0YKK7	550 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651		M0R1B8	84 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ACOX3	O15254	700 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	RAD51D	O75771	328 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	WISP3	O95389	354 aa	Predicted RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	IGHV3-9	P01782	118 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	DEK	P35659	375 aa	Known RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	TPM4	P67936	248 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SLC25A3	Q00325	362 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HIST2H2AC	Q16777	129 aa	Predicted RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SEL1L2	Q5TEA6	688 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HBM	Q6B0K9	141 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HIST2H2AA3	Q6FI13	130 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	FAM45BP	Q6NSW5	357 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CYP20A1	Q6UW02	462 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	FRA10AC1	Q70Z53	315 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CNTN4	Q8IWV2	1026 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	LMNTD2	Q8IXW0	634 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	OR2V1	Q8NHB1	315 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	FAM45A	Q8TCE6	357 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	STK35	Q8TDR2	534 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF418	Q8TF45	676 aa	Predicted RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	C22orf15	Q8WYQ4	148 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	OSTF1	Q92882	214 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF524	Q96C55	264 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HRASLS5	Q96KN8	279 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	VRK1	Q99986	396 aa	Predicted RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	NARFL	Q9H6Q4	476 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CAB39L	Q9H9S4	337 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	RNF14	Q9UBS8	474 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	MCTS1	Q9ULC4	181 aa	Known RBP	7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	TRAF6	Q9Y4K3	522 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	PPIAL4A	Q9Y536	164 aa		7.54	□□□□□ -1.2
NIF3L1-206	ENST00000416651	LOC390937	A0A1W2PQ73	354 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ATP6V1G2-DDX39B	F2Z307	99 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ADAMDEC1	O15204	470 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SYNGR4	O95473	234 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	KRT14	P02533	472 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	PRB2	P02812	416 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	IGFBP1	P08833	259 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	TACSTD2	P09758	323 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	MLN	P12872	115 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF17	P17021	662 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ADRA2C	P18825	462 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ENPP1	P22413	925 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	IL12B	P29460	328 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	HPD	P32754	393 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SFTPD	P35247	375 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	UBA52	P62987	128 aa	Known RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	LAPTM5	Q13571	262 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	TBCC	Q15814	346 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF239	Q16600	458 aa	Known RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	PRSS53	Q2L4Q9	553 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CNGA4	Q8IV77	575 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF433	Q8N7K0	673 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	RNF128	Q8TEB7	428 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZBTB8A	Q96BR9	441 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	MTBP	Q96DY7	904 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	CNRIP1	Q96F85	164 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	RNF145	Q96MT1	663 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	VSTM2L	Q96N03	204 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF681	Q96N22	645 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	ZNF300	Q96RE9	604 aa	Predicted RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	DESI2	Q9BSY9	194 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	INPP5K	Q9BT40	448 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	RBM4	Q9BWF3	364 aa	Known RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	WBP11	Q9Y2W2	641 aa	Known RBP	7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	SLC25A15	Q9Y619	301 aa		7.53	□□□□□ -1.2
NIF3L1-206	ENST00000416651	EPPK1	P58107	5090 aa	Known RBP	7.52	□□□□□ -1.2
NIF3L1-206	ENST00000416651	OR5H1	A6NKK0	313 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NDUFS8	O00217	210 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PHGDH	O43175	533 aa	Known RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PGM3	O95394	542 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	IGKV1D-16	P01601	117 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	KLK1	P06870	262 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TPM1	P09493	284 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NUDT17	P0C025	328 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	HKR1	P10072	659 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	NTF4	P34130	210 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PNLIPRP2	P54317	469 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	DVL1P1	P54792	670 aa	Predicted RBP	7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	ZNF628	Q5EBL2	1059 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	PAGE2B	Q5JRK9	111 aa		7.52	□□□□□ -1.21
NIF3L1-206	ENST00000416651	TMEM201	Q5SNT2	666 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms