RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SCRN3Q0VDG4 424 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 FAM69BQ5VUD6 431 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 MRPL38Q96DV4 380 aaKnown RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 INPP5EQ9NRR6 644 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 SLC25A37Q9NYZ2 338 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 NUP205Q92621 2012 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 BCL6P41182 706 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 SLC48A1Q6P1K1 146 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 LAS2Q8IYD9 372 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 TCTN2Q96GX1 697 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 LMF2Q9BU23 707 aaKnown RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 BEX2Q9BXY8 128 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 BEX1Q9HBH7 125 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 MBNL1Q9NR56 388 aaKnown RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 PIGAP37287 484 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 MEPCEQ7L2J0 689 aaKnown RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 ENTHD1Q8IYW4 607 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 DTX3Q8N9I9 347 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 OR5AK2Q8NH90 309 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 DDIT4LQ96D03 193 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 UCKL1Q9NWZ5 548 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 FARSAQ9Y285 508 aaKnown RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 SYT5O00445 386 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 CCR2P41597 374 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 RAB2AP61019 212 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 GAB1Q13480 694 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 NTRK2Q16620 822 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF595Q8IYB9 648 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 RLN3Q8WXF3 142 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 ELSPBP1Q96BH3 223 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 TMEM121BQ9BXQ6 578 aaPredicted RBP15.67■□□□□ 0.1
PHRF1-201ENST00000264555 ATG5Q9H1Y0 275 aa15.67■□□□□ 0.1
PHRF1-201ENST00000264555 WASHC1A8K0Z3 465 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ART1P52961 327 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 AP2S1P53680 142 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 DUSP6Q16828 381 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 WASH2PQ6VEQ5 465 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ADAMTS19Q8TE59 1207 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ITPKCQ96DU7 683 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 KANTRA0A1W2PQU2 76 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 SMIM18P0DKX4 95 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 VAMP1P23763 118 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 LCN1P31025 176 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 PXNP49023 591 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF84P51523 738 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 MAZP56270 477 aaKnown RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 EIF5AP63241 154 aaKnown RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 E2F1Q01094 437 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 MRPL2Q5T653 305 aaKnown RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 TBC1D20Q96BZ9 403 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 AMBRA1Q9C0C7 1298 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 KIR3DX1Q9H7L2 352 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 MED17Q9NVC6 651 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 A0A1B0GTL3 188 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 FXYD1O00168 92 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 JUNBP17275 347 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 SGCAQ16586 387 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF385DQ9H6B1 395 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 SRPK3Q9UPE1 567 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 FXYD6-FXYD2A0A087WZ82 144 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 RBMXL2O75526 392 aaKnown RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 GTF2F2P13984 249 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 TP53I3Q53FA7 332 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 TMEM184AQ6ZMB5 413 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 SDR9C7Q8NEX9 313 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 OR8S1Q8NH09 359 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 MSLNLQ96KJ4 702 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 SGPP1Q9BX95 441 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 FXYD6Q9H0Q3 95 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 EGLN3Q9H6Z9 239 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 PCDHB16Q9NRJ7 776 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 PLEKHA6Q9Y2H5 1048 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ATG4BQ9Y4P1 393 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ASB4Q9Y574 426 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 FCER2P06734 321 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 ERCC1P07992 297 aaPredicted RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 KLHL15Q96M94 604 aa15.66■□□□□ 0.1
PHRF1-201ENST00000264555 NOP16Q9Y3C1 178 aaKnown RBP15.66■□□□□ 0.1
PHRF1-201ENST00000264555 TCRBV5S2A0A599 114 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 SEC14L2O76054 403 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 ELAVL4P26378 380 aaKnown RBP15.65■□□□□ 0.1
PHRF1-201ENST00000264555 KIAA1024LP59773 190 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 SLC25A25Q6KCM7 469 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 TRMT10AQ8TBZ6 339 aaKnown RBP15.65■□□□□ 0.1
PHRF1-201ENST00000264555 DIO2Q92813 273 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 FTSJ1Q9UET6 329 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 L7N2F9 121 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 H2AFB2P0C5Z0 115 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 GPR18Q14330 331 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 DCDC5Q6ZRR9 648 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF717Q9BY31 904 aaPredicted RBP15.65■□□□□ 0.1
PHRF1-201ENST00000264555 UBQLN4Q9NRR5 601 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 SCN1AP35498 2009 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 LRIT2A6NDA9 550 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 CAPNS1P04632 268 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 PRKAR1BP31321 381 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 PYHIN1Q6K0P9 492 aa15.65■□□□□ 0.1
PHRF1-201ENST00000264555 C19orf47Q8N9M1 422 aaKnown RBP15.65■□□□□ 0.1
PHRF1-201ENST00000264555 NIPSNAP1Q9BPW8 284 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms