RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TEX19Q8NA77 164 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 FAM98AQ8NCA5 519 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 BHLHE22Q8NFJ8 381 aaPredicted RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 OR52P1PQ8NH57 321 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 KCTD14Q9BQ13 255 aaPredicted RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 SPATA5L1Q9BVQ7 753 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 LRMDAQ9H2I8 198 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 UBQLN3Q9H347 655 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 ZFP64Q9NPA5 681 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 QPCTLQ9NXS2 382 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 TUBA8Q9NY65 449 aaPredicted RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 ADA2Q9NZK5 511 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 ANAPC2Q9UJX6 822 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 BOKQ9UMX3 212 aaPredicted RBP12.88□□□□□ -0.35
VPS25-201ENST00000253794 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
VPS25-201ENST00000253794 PINLYPA6NC86 204 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 B4DXG7 233 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 GYG2O15488 501 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 NDUFB5O43674 189 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 SERPINB7O75635 380 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 MFN2O95140 757 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 RASAL1O95294 804 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 GGT1P19440 569 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 PGM1P36871 562 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 GPR85P60893 370 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 NCALDP61601 193 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 EEF1A1P68104 462 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 KCNJ10P78508 379 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 BNIP2Q12982 314 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 LARS2Q15031 903 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 PGM2L1Q6PCE3 622 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 EIF3MQ7L2H7 374 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 OR52E4Q8NGH9 312 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 TAAR6Q96RI8 345 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 PIF1Q9H611 641 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 ZNF703Q9H7S9 590 aaPredicted RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 EVA1AQ9H8M9 152 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 GMPR2Q9P2T1 348 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 ZNF443Q9Y2A4 671 aaPredicted RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 MRPS18CQ9Y3D5 142 aaKnown RBP12.87□□□□□ -0.35
VPS25-201ENST00000253794 CHST2Q9Y4C5 530 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
VPS25-201ENST00000253794 CDHR4A6H8M9 788 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 G3V3Y1 287 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 SYT5O00445 386 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 SCO2O43819 266 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 CBR3O75828 277 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 DNAJC8O75937 253 aaPredicted RBP12.86□□□□□ -0.35
VPS25-201ENST00000253794 C8BP07358 591 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 UBL4AP11441 157 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 IL7RP16871 459 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 KDELR2P33947 212 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 SUMO3P55854 103 aaPredicted RBP12.86□□□□□ -0.35
VPS25-201ENST00000253794 SKP2Q13309 424 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
VPS25-201ENST00000253794 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ASRGL1Q7L266 308 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 OR2M3Q8NG83 312 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 TAMM41Q96BW9 452 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 BBC3Q96PG8 261 aaPredicted RBP12.86□□□□□ -0.35
VPS25-201ENST00000253794 LAT2Q9GZY6 243 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
VPS25-201ENST00000253794 MUC13Q9H3R2 512 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 GORASP2Q9H8Y8 452 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 PPP4R1LQ9P1A2 415 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 MAGEL2Q9UJ55 1249 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ICAM5Q9UMF0 924 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
VPS25-201ENST00000253794 PRRC2CQ9Y520 2896 aaKnown RBP12.85□□□□□ -0.35
VPS25-201ENST00000253794 TMEM229AB2RXF0 380 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 M0QX08 132 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 ETV2O00321 342 aaPredicted RBP12.85□□□□□ -0.35
VPS25-201ENST00000253794 FAAHO00519 579 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 CXCR6O00574 342 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 GSC2O15499 205 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 ZNF264O43296 627 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 CSTAP01040 98 aa12.85□□□□□ -0.35
VPS25-201ENST00000253794 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms